RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 FAM45BPQ6NSW5 357 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CGB2Q6NT52 195 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 LINGO4Q6UY18 593 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TPGS1Q6ZTW0 290 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 OTOAQ7RTW8 1153 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 GLT6D1Q7Z4J2 308 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 SPRED2Q7Z698 418 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TMEM25Q86YD3 366 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 DENND6AQ8IWF6 608 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TTC30BQ8N4P2 665 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 OR2AP1Q8NGE2 309 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 OR6Y1Q8NGX8 325 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 OR6P1Q8NGX9 317 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 OR4L1Q8NH43 312 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 FAM45AQ8TCE6 357 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 BLOC1S5Q8TDH9 187 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PIH1D2Q8WWB5 315 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 DNAJC1Q96KC8 554 aaKnown RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 TBATAQ96M53 351 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 ZNF641Q96N77 438 aaPredicted RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 C1QTNF1Q9BXJ1 281 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 ATP13A3Q9H7F0 1226 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PIDD1Q9HB75 910 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 GDE1Q9NZC3 331 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PCDH10Q9P2E7 1040 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 COPG2Q9UBF2 871 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 SLC25A13Q9UJS0 675 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 SLC39A10Q9ULF5 831 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 ACOT9Q9Y305 439 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 FCF1Q9Y324 198 aaKnown RBP11.67□□□□□ -0.54
PRKCB-207ENST00000486868 PCDHGC4Q9Y5F7 938 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 USH1CQ9Y6N9 552 aa11.67□□□□□ -0.54
PRKCB-207ENST00000486868 CCDC162PA2VCL2 907 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CD3EAPO15446 510 aaKnown RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ZNF821O75541 412 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 GJB3O75712 270 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 HAUS5O94927 633 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 WISP3O95389 354 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 PRAMEF12O95522 483 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 MT-CO1P00395 513 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 GOT2P00505 430 aaKnown RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ASLP04424 464 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SERPINE1P05121 402 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 PDHA1P08559 390 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SLC35E2BP0CK96 405 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 NEFHP12036 1026 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SRCP12931 536 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 TYRP14679 529 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 BGNP21810 368 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ALDH3A1P30838 453 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 HMGCLP35914 325 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SUOXP51687 545 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SLC12A2P55011 1212 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ADARP55265 1226 aaKnown RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 MPP1Q00013 466 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 OCRLQ01968 901 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 RAD51Q06609 339 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ASPHQ12797 758 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 IFT88Q13099 833 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 AARS2Q5JTZ9 985 aaKnown RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CCDC121Q6ZUS5 278 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 TRPM8Q7Z2W7 1104 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CMC1Q7Z7K0 106 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ADGRD2Q7Z7M1 963 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 AHI1Q8N157 1196 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CBARPQ8N350 705 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 KDM1BQ8NB78 822 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 LPCAT1Q8NF37 534 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 MDGA1Q8NFP4 955 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 VN1R2Q8NFZ6 395 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 RIN3Q8TB24 985 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 HCAR2Q8TDS4 363 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 OSCP1Q8WVF1 389 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CCT6BQ92526 530 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ECHDC3Q96DC8 303 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 MYO19Q96H55 970 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 OMDQ99983 421 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 GDF15Q99988 308 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 BBS2Q9BXC9 721 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 PBX4Q9BYU1 374 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 TRIM55Q9BYV6 548 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 FAM96AQ9H5X1 160 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
PRKCB-207ENST00000486868 NMRAL1Q9HBL8 299 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CATSPERZQ9NTU4 200 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 TMEM216Q9P0N5 145 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 CLEC4EQ9ULY5 219 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SLC27A6Q9Y2P4 619 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 VWA7Q9Y334 891 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 SPO11Q9Y5K1 396 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 ARL5AQ9Y689 179 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 COMMD10Q9Y6G5 202 aa11.66□□□□□ -0.54
PRKCB-207ENST00000486868 A0A0J9YYE9 177 aa11.65□□□□□ -0.54
PRKCB-207ENST00000486868 GOLGA8TH3BQL2 631 aa11.65□□□□□ -0.54
PRKCB-207ENST00000486868 PER2O15055 1255 aa11.65□□□□□ -0.54
PRKCB-207ENST00000486868 STX7O15400 261 aaKnown RBP11.65□□□□□ -0.54
PRKCB-207ENST00000486868 SMAD6O43541 496 aaKnown RBP11.65□□□□□ -0.54
PRKCB-207ENST00000486868 KLHL2O95198 593 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms