RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.44■□□□□ 0.86
HPS3-206ENST00000486530 CXXC1Q9P0U4 656 aaPredicted RBP20.44■□□□□ 0.86
HPS3-206ENST00000486530 MARCH4Q9P2E8 410 aaPredicted RBP20.44■□□□□ 0.86
HPS3-206ENST00000486530 TAGLN3Q9UI15 199 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 SSX2IPQ9Y2D8 614 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 RAP2CQ9Y3L5 183 aa20.44■□□□□ 0.86
HPS3-206ENST00000486530 GYG2O15488 501 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 TBL1XO60907 577 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 FGF18O76093 207 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 GOT2P00505 430 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 HOXB8P17481 243 aaPredicted RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 OGNP20774 298 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 MNAT1P51948 309 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 ARF5P84085 180 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 FPGSQ05932 587 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CFAP157Q5JU67 520 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 TMEM240Q5SV17 173 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 FAM45BPQ6NSW5 357 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 TDRD5Q8NAT2 981 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 FAM45AQ8TCE6 357 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 EXOC2Q96KP1 924 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 ZBP1Q9H171 429 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 VWA7Q9Y334 891 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 OR51F1A6NGY5 319 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 H0Y626 953 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CD3EAPO15446 510 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 DLX3O60479 287 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 ENO1P06733 434 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 LTA4HP09960 611 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 AOC1P19801 751 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CSHL1Q14406 222 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 KLC3Q6P597 504 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 Q6ZNB5 142 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CARNMT1Q8N4J0 409 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 FIBCD1Q8N539 461 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 ARL14EPQ8N8R7 260 aaPredicted RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 FAM13CQ8NE31 585 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 SLC22A12Q96S37 553 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CYP2S1Q96SQ9 504 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CADM1Q9BY67 442 aaKnown RBP20.43■□□□□ 0.86
HPS3-206ENST00000486530 GPAMQ9HCL2 828 aa20.43■□□□□ 0.86
HPS3-206ENST00000486530 CCDC162PA2VCL2 907 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 GREM1O60565 184 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 TMCC1O94876 653 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 SNUPNO95149 360 aaKnown RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 LUC7L3O95232 432 aaKnown RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 CTSAP10619 480 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 HDCP19113 662 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 SLC26A3P40879 764 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 ZNF140P52738 457 aaPredicted RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 USP4Q13107 963 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 TECRLQ5HYJ1 363 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 RINLQ6ZS11 566 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 TEX9Q8N6V9 391 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 OR13C4Q8NGS5 318 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 ADAMTS19Q8TE59 1207 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 PDCD6IPQ8WUM4 868 aaKnown RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 CLP1Q92989 425 aaKnown RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 RMDN1Q96DB5 314 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 NSMCE3Q96MG7 304 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 SUDS3Q9H7L9 328 aaPredicted RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 COG4Q9H9E3 785 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 CATSPERZQ9NTU4 200 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 NLE1Q9NVX2 485 aaPredicted RBP20.42■□□□□ 0.86
HPS3-206ENST00000486530 PRKAG2Q9UGJ0 569 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 CPQQ9Y646 472 aa20.42■□□□□ 0.86
HPS3-206ENST00000486530 GFRA2O00451 464 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 PIRTP0C851 137 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 NAGLUP54802 743 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 PRKAA1Q13131 559 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 TAF1AQ15573 450 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 TXNDC8Q6A555 127 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 EPGNQ6UW88 154 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 TMC7Q7Z402 723 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 LDB1Q86U70 411 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 FAM217AQ8IXS0 508 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 SPATA6LQ8N4H0 392 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 OR4L1Q8NH43 312 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 CCDC126Q96EE4 140 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 CD248Q9HCU0 757 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 TAS2R1Q9NYW7 299 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 LSM7Q9UK45 103 aaKnown RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 INSL6Q9Y581 213 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 PRR5-ARHGAP8B1AHC4 643 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 SPECC1L-ADORA2AF8WAN1 911 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 GSC2O15499 205 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 BUD23O43709 281 aaKnown RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 NPHS1O60500 1241 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 DIAPH2O60879 1101 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 ZMPSTE24O75844 475 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 WISP3O95389 354 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 CHRNGP07510 517 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 RBP1P09455 135 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 ATP5F1P24539 256 aaPredicted RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 CA8P35219 290 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 SERPINB5P36952 375 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 DNAJB13P59910 316 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 ARHGAP8P85298 464 aa20.41■□□□□ 0.86
HPS3-206ENST00000486530 UBAP2LQ14157 1087 aaKnown RBP20.41■□□□□ 0.86
HPS3-206ENST00000486530 ACAP2Q15057 778 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms