RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 EMC1Q8N766 993 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 ATP11CQ8NB49 1132 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 JOSD2Q8TAC2 188 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 GRIN3AQ8TCU5 1115 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 RXFP2Q8WXD0 754 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 NT5C3BQ969T7 300 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 VOPP1Q96AW1 172 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 CFAP57Q96MR6 1250 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 FMO2Q99518 471 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 TRIM62Q9BVG3 475 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 WDCPQ9H6R7 721 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 NDFIP2Q9NV92 336 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF212Q9UDV6 495 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 DOCK4Q8N1I0 1966 aa9.52□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF462Q96JM2 2506 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ARID1BQ8NFD5 2236 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 TCRBV7S2A1N4TA0A589 114 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ESYT3A0FGR9 886 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 LRRD1A4D1F6 860 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ZSCAN5CA6NGD5 496 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 GOLGA8KD6RF30 607 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 E9PAM4 449 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SMAPO00193 183 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 RAD51BO15315 384 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SIGLEC6O43699 453 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 PRPSAP2O60256 369 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 PPFIA2O75334 1257 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 CLDN11O75508 207 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 GIMD1P0DJR0 217 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC2A3P11169 496 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 JUPP14923 745 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 KDELR1P24390 212 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 OAS2P29728 719 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ECHS1P30084 290 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 MIPP30301 263 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ACVRL1P37023 503 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 EIF3BP55884 814 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 CBX1P83916 185 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ARF5P84085 180 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 DEUP1Q05D60 604 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 C15orf59Q2T9L4 293 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ZNF284Q2VY69 593 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 TPRG1LQ5T0D9 272 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 HES3Q5TGS1 186 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 TTC39BQ5VTQ0 682 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 TTC27Q6P3X3 843 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 FBXL19Q6PCT2 694 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 MFSD7Q6UXD7 560 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 DPY19L3Q6ZPD9 716 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 BBS12Q6ZW61 710 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 STRADAQ7RTN6 431 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM131BQ86XD5 332 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 IQCKQ8N0W5 287 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SLC22A18ASQ8N1D0 253 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 KCTD6Q8NC69 237 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 CENPIQ92674 756 aaPredicted RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ART4Q93070 314 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SNF8Q96H20 258 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SH3GL2Q99962 352 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 SPON2Q9BUD6 331 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 ZDHHC18Q9NUE0 388 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 RRN3Q9NYV6 651 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 RAI2Q9Y5P3 530 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 WASF2Q9Y6W5 498 aa9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 DSPP15924 2871 aaKnown RBP9.51□□□□□ -0.89
TMEM39A-208ENST00000486159 C3orf70A6NLC5 250 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 A6NNZ2 444 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 C1QTNF3-AMACRE9PGA6 284 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM72CH0Y354 149 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FFAR2O15552 330 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 LIASO43766 372 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 DFNA5O60443 496 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 LEFTY1O75610 366 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 RFPL3O75679 317 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 ZMPSTE24O75844 475 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 PRB1P04280 392 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 THEGLP0DJG4 465 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 ZFXP17010 805 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 RPL21P46778 160 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 RXRGP48443 463 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 AIF1P55008 147 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 MRPS25P82663 173 aaKnown RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 ATP11AP98196 1134 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 INSM1Q01101 510 aaPredicted RBP9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 SEMG2Q02383 582 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 STAT4Q14765 748 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 CDO1Q16878 200 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 PROX2Q3B8N5 592 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TUBB8Q3ZCM7 444 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 CCDC14Q49A88 953 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM72AQ5TYM5 149 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM72DQ6L9T8 149 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 GCNT7Q6ZNI0 430 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 BNIPLQ7Z465 357 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TMC3Q7Z5M5 1100 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 TRIM69Q86WT6 500 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 FAM72BQ86X60 149 aa9.5□□□□□ -0.89
TMEM39A-208ENST00000486159 GSPT2Q8IYD1 628 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms