RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ANP32EQ9BTT0 268 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 APOOQ9BUR5 198 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 SLC13A1Q9BZW2 595 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 GPR27Q9NS67 375 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 SPASTQ9UBP0 616 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 B4GALT6Q9UBX8 382 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 MOSPD1Q9UJG1 213 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 TFR2Q9UP52 801 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 PCDHGA1Q9Y5H4 931 aa17.74■□□□□ 0.43
COL6A1-204ENST00000486023 GOLGA6CA6NDK9 693 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 GOLGA6BA6NDN3 693 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 TRABD2BA6NFA1 517 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 SPOPO43791 374 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 KRT1P04264 644 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 GOLGA6DP0CG33 693 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 GIMD1P0DJR0 217 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 CTSEP14091 401 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 HTR1BP28222 390 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 ARHGAP25P42331 645 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 DYNLT1P63172 113 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 PPARDQ03181 441 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 LLGL1Q15334 1064 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 SMAD1Q15797 465 aaKnown RBP17.73■□□□□ 0.43
COL6A1-204ENST00000486023 IFI16Q16666 785 aaKnown RBP17.73■□□□□ 0.43
COL6A1-204ENST00000486023 ARMC12Q5T9G4 340 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 HES3Q5TGS1 186 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 NYAP1Q6ZVC0 841 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 DPPA4Q7L190 304 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 LRRC49Q8IUZ0 686 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 BTN2A2Q8WVV5 523 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 RFFLQ8WZ73 363 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 RNF157Q96PX1 679 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 CCDC86Q9H6F5 360 aaKnown RBP17.73■□□□□ 0.43
COL6A1-204ENST00000486023 GOLGA6AQ9NYA3 693 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 NLGN3Q9NZ94 848 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 PNMA8BQ9ULN7 279 aaPredicted RBP17.73■□□□□ 0.43
COL6A1-204ENST00000486023 PHTF1Q9UMS5 762 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 DOLKQ9UPQ8 538 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 RAI2Q9Y5P3 530 aa17.73■□□□□ 0.43
COL6A1-204ENST00000486023 A0A0U1RQS6 177 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 CPED1A4D0V7 1026 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 TMEM8BA6NDV4 472 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 MATN3O15232 486 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 GCATO75600 419 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 C1SP09871 688 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 CR2P20023 1033 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 ZNF75DP51815 510 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 DSC2Q02487 901 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 SLC10A2Q12908 348 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 TARDBPQ13148 414 aaKnown RBP eCLIP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 TIGD7Q6NT04 549 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 MACC1Q6ZN28 852 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 B4GALNT4Q76KP1 1039 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 TMPRSS12Q86WS5 348 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 RFX6Q8HWS3 928 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 ZNF830Q96NB3 372 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 DUSP23Q9BVJ7 150 aa17.72■□□□□ 0.43
COL6A1-204ENST00000486023 POLR1EQ9GZS1 481 aaKnown RBP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 SUDS3Q9H7L9 328 aaPredicted RBP17.72■□□□□ 0.43
COL6A1-204ENST00000486023 TP53BP1Q12888 1972 aaPredicted RBP17.71■□□□□ 0.43
COL6A1-204ENST00000486023 USP24Q9UPU5 2620 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 KCNK1O00180 336 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 SOCS5O75159 536 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 JCHAINP01591 159 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 ANXA6P08133 673 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 ALPIP09923 528 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 CCNB1P14635 433 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 TSHRP16473 764 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 MX2P20592 715 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 COMTP21964 271 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 ACP1P24666 158 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 CCNCP24863 283 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 VIPR1P32241 457 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 HNF1BP35680 557 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 EPHB1P54762 984 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 CYP4F3Q08477 520 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 AP1B1Q10567 949 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 NFATC4Q14934 902 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 SPA17Q15506 151 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 CDKN3Q16667 212 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 NPNTQ6UXI9 565 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 CCDC13Q8IYE1 715 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 TEX26Q8N6G2 289 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 SMIM14Q96QK8 99 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 LGMNQ99538 433 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 ABCG4Q9H172 646 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 GOLPH3Q9H4A6 298 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 DTLQ9NZJ0 730 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 SEPT10Q9P0V9 454 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 GULP1Q9UBP9 304 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 KLQ9UEF7 1012 aa17.71■□□□□ 0.43
COL6A1-204ENST00000486023 A0A1W2PQ67 120 aa17.7■□□□□ 0.42
COL6A1-204ENST00000486023 CACNB4O00305 520 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-204ENST00000486023 APOL1O14791 398 aa17.7■□□□□ 0.42
COL6A1-204ENST00000486023 HTRA2O43464 458 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-204ENST00000486023 PGLSO95336 258 aa17.7■□□□□ 0.42
COL6A1-204ENST00000486023 CELA2BP08218 269 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-204ENST00000486023 PDHA1P08559 390 aa17.7■□□□□ 0.42
COL6A1-204ENST00000486023 CYP2A6P11509 494 aaPredicted RBP17.7■□□□□ 0.42
COL6A1-204ENST00000486023 CDK4P11802 303 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms