RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 DEFB115Q30KQ5 88 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 FAM83BQ5T0W9 1011 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 CAPRIN2Q6IMN6 1127 aaKnown RBP4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 PALB2Q86YC2 1186 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 MYCT1Q8N699 235 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 NCSTNQ92542 709 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 CAPNS2Q96L46 248 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 GFM1Q96RP9 751 aaKnown RBP4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 TM6SF1Q9BZW5 370 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 IL36RNQ9UBH0 155 aa4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 USP42Q9H9J4 1324 aaKnown RBP4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 EDC4Q6P2E9 1401 aaKnown RBP4.88□□□□□ -1.63
SMARCC1-207ENST00000485833 CENPFP49454 3210 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 TARSL2A2RTX5 802 aaKnown RBP4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 OR6C68A6NDL8 312 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 EYA2O00167 538 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 ASAP2O43150 1006 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 HBP1O60381 514 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 SOX30O94993 753 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 CBX6O95503 412 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 TNNT1P13805 278 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 YWHAQP27348 245 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 TM4SF1P30408 202 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 RFC4P35249 363 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 THPOP40225 353 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 NUDT6P53370 316 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 IL13RA2Q14627 380 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 TDRD12Q587J7 1177 aaKnown RBP4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 TMC8Q8IU68 726 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 DCP1BQ8IZD4 617 aaKnown RBP4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 LINS1Q8NG48 757 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 KIF17Q9P2E2 1029 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 ABT1Q9ULW3 272 aaKnown RBP4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 DERAQ9Y315 318 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 NCAPD2Q15021 1401 aa4.87□□□□□ -1.63
SMARCC1-207ENST00000485833 ARFGEF2Q9Y6D5 1785 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 NAGAP17050 411 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 AMPHP49418 695 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 ACTR2P61160 394 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 MAP2K1Q02750 393 aaPredicted RBP4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 OS9Q13438 667 aaPredicted RBP4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 NFATC4Q14934 902 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 PRAMEF19Q5SWL8 479 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 CST9Q5W186 159 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 ATG9BQ674R7 924 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 NCAPH2Q6IBW4 605 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 OLFM4Q6UX06 510 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 MON1BQ7L1V2 547 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 TEX45Q8NA69 505 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 OR14A16Q8NHC5 309 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 TMEM18Q96B42 140 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 RBM17Q96I25 401 aaKnown RBP4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 PPP1R10Q96QC0 940 aaKnown RBP4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 CTDSP1Q9GZU7 261 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 LHPPQ9H008 270 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 CXorf56Q9H5V9 222 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 TMOD3Q9NYL9 352 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 RIPOR2Q9Y4F9 1068 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 RNF123Q5XPI4 1314 aa4.86□□□□□ -1.63
SMARCC1-207ENST00000485833 A0A096LPK6 155 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 CRKLP46109 303 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 GPR12P47775 334 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 AMTP48728 403 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 GOLGA8FQ08AF8 430 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 TRAF2Q12933 501 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 RPE65Q16518 533 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 C10orf62Q5T681 223 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 GJB7Q6PEY0 223 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 C2CD5Q86YS7 1000 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 CNTROBQ8N137 903 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 TMEM57Q8N5G2 664 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 MIGA1Q8NAN2 632 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 SETD9Q8NE22 299 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 AFG1LQ8WV93 481 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 ATOH1Q92858 354 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 MASTLQ96GX5 879 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 CDT1Q9H211 546 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 C6orf106Q9H6K1 298 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 TLR8Q9NR97 1041 aaKnown RBP4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 HDAC6Q9UBN7 1215 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 CD207Q9UJ71 328 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 RTL1A6NKG5 1358 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 ANKRD26Q9UPS8 1709 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 BCORQ6W2J9 1755 aa4.85□□□□□ -1.63
SMARCC1-207ENST00000485833 NOTCH4Q99466 2003 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 CGNL1Q0VF96 1302 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 STX16-NPEPL1H3BU86 382 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 STX16O14662 325 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 IL1AP01583 271 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 FCGR1AP12314 374 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 EPHX2P34913 555 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 GRK6P43250 576 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 PTPN9P43378 593 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 TRAPPC10P48553 1259 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 ART1P52961 327 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 ADCK5Q3MIX3 580 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 CTXN3Q4LDR2 81 aa4.84□□□□□ -1.63
SMARCC1-207ENST00000485833 CBWD5Q5RIA9 395 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms