RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 CYP4V2Q6ZWL3 525 aaPredicted RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 GKN2Q86XP6 184 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 LZTR1Q8N653 840 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 NPWQ8N729 165 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 ARL10Q8N8L6 244 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 ECHDC3Q96DC8 303 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 TRIM11Q96F44 468 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 WDR92Q96MX6 357 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 ZWILCHQ9H900 591 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 MRPL47Q9HD33 250 aaKnown RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 ASCL3Q9NQ33 180 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 CWC15Q9P013 229 aaKnown RBP17.25■□□□□ 0.35
SMC4-216ENST00000485645 SIRPGQ9P1W8 387 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 MYO1AQ9UBC5 1043 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 ANKRD36A6QL64 1941 aa17.25■□□□□ 0.35
SMC4-216ENST00000485645 TEX51A0A1B0GUA7 166 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 TK2O00142 265 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 ATXN7O15265 892 aaPredicted RBP17.24■□□□□ 0.35
SMC4-216ENST00000485645 RECQL5O94762 991 aaPredicted RBP17.24■□□□□ 0.35
SMC4-216ENST00000485645 TNFP01375 233 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 ELFN1P0C7U0 828 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 MYBL1P10243 752 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 SPIDRQ14159 915 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 TCEA2Q15560 299 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 LIPIQ6XZB0 460 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 KCNE4Q8WWG9 221 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 SLC39A7Q92504 469 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
SMC4-216ENST00000485645 SLC46A1Q96NT5 459 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 SYNDIG1Q9H7V2 258 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 SEPT3Q9UH03 358 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 GPR34Q9UPC5 381 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 PCDHGA8Q9Y5G5 932 aa17.24■□□□□ 0.35
SMC4-216ENST00000485645 COL27A1Q8IZC6 1860 aaPredicted RBP17.24■□□□□ 0.35
SMC4-216ENST00000485645 A0A1B0GTH6 734 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 CACNB4O00305 520 aaPredicted RBP17.23■□□□□ 0.35
SMC4-216ENST00000485645 TRAFD1O14545 582 aaPredicted RBP17.23■□□□□ 0.35
SMC4-216ENST00000485645 SKILP12757 684 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 PCK1P35558 622 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 ZNF165P49910 485 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 UCNP55089 124 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 AP1S1P61966 158 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 RALGDSQ12967 914 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 DPYSQ14117 519 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 LBRQ14739 615 aaKnown RBP17.23■□□□□ 0.35
SMC4-216ENST00000485645 TMCO4Q5TGY1 634 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 KYQ8NBH2 561 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 PLA2G15Q8NCC3 412 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 LSM14AQ8ND56 463 aaKnown RBP17.23■□□□□ 0.35
SMC4-216ENST00000485645 WDR36Q8NI36 951 aaKnown RBP17.23■□□□□ 0.35
SMC4-216ENST00000485645 ZNF599Q96NL3 588 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 PSKH2Q96QS6 385 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 DGKBQ9Y6T7 804 aa17.23■□□□□ 0.35
SMC4-216ENST00000485645 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.22■□□□□ 0.35
SMC4-216ENST00000485645 A0A1W2PNU3 283 aaPredicted RBP17.22■□□□□ 0.35
SMC4-216ENST00000485645 H3BRJ5 948 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 KLK10O43240 276 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 KELP23276 732 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 ARL4AP40617 200 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 TMPRSS3P57727 454 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 KIAA1024LP59773 190 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 SLC10A7Q0GE19 358 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 DPYSL2Q16555 572 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 KIF26BQ2KJY2 2108 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 BOLA3Q53S33 107 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 FOXR1Q6PIV2 292 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 NYAP1Q6ZVC0 841 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 DPPA4Q7L190 304 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 TP53INP2Q8IXH6 220 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 ARL14Q8N4G2 192 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 OR6C4Q8NGE1 309 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 OR56A4Q8NGH8 313 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 CCDC74AQ96AQ1 378 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 PDXPQ96GD0 296 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 RBM15Q96T37 977 aaKnown RBP eCLIP17.22■□□□□ 0.35
SMC4-216ENST00000485645 DPH1Q9BZG8 443 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 ISCUQ9H1K1 167 aa17.22■□□□□ 0.35
SMC4-216ENST00000485645 LRP4O75096 1905 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 CCDC187A0A096LP49 1063 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 TMEM202A6NGA9 273 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 NTN3O00634 580 aaPredicted RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 CASC3O15234 703 aaKnown RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 SERPINC1P01008 464 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 PRB1P04280 392 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 HOXC4P09017 264 aaPredicted RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 IL1R2P27930 398 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 C19orf57Q0VDD7 668 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 ZNF235Q14590 738 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 NR1I3Q14994 352 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 SMTNL2Q2TAL5 461 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 TMCO3Q6UWJ1 677 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 HSPH1Q92598 858 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 FUBP1Q96AE4 644 aaKnown RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 CCDC97Q96F63 343 aaPredicted RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 PRR11Q96HE9 360 aaPredicted RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 NSMCE3Q96MG7 304 aa17.21■□□□□ 0.35
SMC4-216ENST00000485645 GFM1Q96RP9 751 aaKnown RBP17.21■□□□□ 0.35
SMC4-216ENST00000485645 A0A1W2PQ67 120 aa17.2■□□□□ 0.34
SMC4-216ENST00000485645 A8MX80 341 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms