RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 NUDT19A8MXV4 375 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 HHLA1C9JL84 531 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 D6RAR5 112 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TMX2-CTNND1H3BSU7 103 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 K7EM74 188 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 NKX2-8O15522 239 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 AQP9O43315 295 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TBL1XO60907 577 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CNTN5O94779 1100 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CSF2P04141 144 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 FAM200BP0CF97 657 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PRKAR1AP10644 381 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 LIFP15018 202 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PI3P19957 117 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SLC6A4P31645 630 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CCKBRP32239 447 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TOB1P50616 345 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 MYL6P60660 151 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CCL7P80098 99 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CNTN1Q12860 1018 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 FZD2Q14332 565 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ME3Q16798 604 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TMEM119Q4V9L6 283 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 NUGGCQ68CJ6 796 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SCARA5Q6ZMJ2 495 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PTAR1Q7Z6K3 402 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CBWD2Q8IUF1 395 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 WDR49Q8IV35 697 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SYCP3Q8IZU3 236 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 GPD1LQ8N335 351 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SDR16C5Q8N3Y7 309 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ZNF276Q8N554 614 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 C12orf29Q8N999 325 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CPT1CQ8TCG5 803 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PTPRN2Q92932 1015 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 HVCN1Q96D96 273 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 RPL10LQ96L21 214 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ACCSQ96QU6 501 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CDK5RAP1Q96SZ6 601 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 BOCQ9BWV1 1114 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TM6SF1Q9BZW5 370 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 TGIF2Q9GZN2 237 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 FOXP1Q9H334 677 aaPredicted RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 MRPL44Q9H9J2 332 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PRDM8Q9NQV8 689 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SIRT5Q9NXA8 310 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 WHRNQ9P202 907 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SLCO3A1Q9UIG8 710 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ITGB1BP2Q9UKP3 347 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 INTS6Q9UL03 887 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CNOT6Q9ULM6 557 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 STRIP2Q9ULQ0 834 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PADI4Q9UM07 663 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ERVW-1Q9UQF0 538 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 SF3B6Q9Y3B4 125 aaKnown RBP5.47□□□□□ -1.53
PTPN4-210ENST00000485247 KIF3AQ9Y496 699 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CEP83Q9Y592 693 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PCDHA5Q9Y5H7 936 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 CSNK1G3Q9Y6M4 447 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 ZFHX3Q15911 3703 aa5.47□□□□□ -1.53
PTPN4-210ENST00000485247 PCNX1Q96RV3 2341 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 NF1P21359 2839 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 GOLGA6L7A0A1B0GV03 622 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 A0A1W2PQM1 296 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ARHGAP10A1A4S6 786 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF233A6NK53 670 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF891A8MT65 544 aaPredicted RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 STMND1H3BQB6 276 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 TPP1O14773 563 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SLC7A4O43246 635 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 GCATO75600 419 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 REC8O95072 547 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 KIF20AO95235 890 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 GCNT3O95395 438 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ASLP04424 464 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 RPLP0P05388 317 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 DLATP10515 647 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 TNNI1P19237 187 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 HNRNPA2B1P22626 353 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 CD82P27701 267 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 AKT2P31751 481 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ARL4AP40617 200 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 PRPHP41219 470 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 NUMBP49757 651 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 KIF11P52732 1056 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ADKP55263 362 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 TAS2R38P59533 333 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SLC7A5Q01650 507 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 MRPL49Q13405 166 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 TRPC3Q13507 836 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 C1orf61Q13536 156 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 FGL2Q14314 439 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ELAVL3Q14576 367 aaKnown RBP5.46□□□□□ -1.54
PTPN4-210ENST00000485247 TCEAL1Q15170 157 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 SURF1Q15526 300 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 ZNF284Q2VY69 593 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 DEFB109BQ30KR1 87 aa5.46□□□□□ -1.54
PTPN4-210ENST00000485247 L1TD1Q5T7N2 865 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms