RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 TIGD7Q6NT04 549 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 MFSD7Q6UXD7 560 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 UNQ6494/PRO21346Q6UXR6 183 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 LIPIQ6XZB0 460 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 DCP2Q8IU60 420 aaKnown RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 RHOT1Q8IXI2 618 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 CCDC13Q8IYE1 715 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 TEX26Q8N6G2 289 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 PLA2G15Q8NCC3 412 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 ZNF548Q8NEK5 533 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 ZNF830Q96NB3 372 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 PANX2Q96RD6 677 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 LGMNQ99538 433 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 TMEM121BQ9BXQ6 578 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 CEP41Q9BYV8 373 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 RBM22Q9NW64 420 aaKnown RBP eCLIP12.34□□□□□ -0.432e-13■■■■■ 57.4
MSH5-216ENST00000484309 OR1A2Q9Y585 309 aa12.34□□□□□ -0.43
MSH5-216ENST00000484309 ARHGEF17Q96PE2 2063 aaPredicted RBP12.34□□□□□ -0.43
MSH5-216ENST00000484309 KNTC1P50748 2209 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 RCCD1A6NED2 376 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 H3BM21 787 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 KCNK1O00180 336 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 MATN3O15232 486 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 HTRA2O43464 458 aaPredicted RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 RECQL5O94762 991 aaPredicted RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 DKK1O94907 266 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 NDUFA10O95299 355 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 PGLSO95336 258 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 CSF2P04141 144 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 PDHA1P08559 390 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ALPIP09923 528 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 GIMD1P0DJR0 217 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 CCNB1P14635 433 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 JUNDP17535 347 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 GM2AP17900 193 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 CCNCP24863 283 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 SLC1A1P43005 524 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ACADVLP49748 655 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.441e-6■■□□□ 12.4
MSH5-216ENST00000484309 DAB2P98082 770 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 C1orf61Q13536 156 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 IHHQ14623 411 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 INPP5AQ14642 412 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 TCEAL1Q15170 157 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 CNGA3Q16281 694 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ST3GAL2Q16842 350 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ARMC12Q5T9G4 340 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 SLC9A4Q6AI14 798 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 RAD9BQ6WBX8 426 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 LRRC49Q8IUZ0 686 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 CCDC170Q8IYT3 715 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 SPC24Q8NBT2 197 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ACRBPQ8NEB7 543 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 OR4C6Q8NH72 309 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 LMX1AQ8TE12 382 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 MAML1Q92585 1016 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 GATA6Q92908 595 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 HDAC11Q96DB2 347 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ANP32EQ9BTT0 268 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 MAK16Q9BXY0 300 aaKnown RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 POLR1EQ9GZS1 481 aaKnown RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 APOBEC3BQ9UH17 382 aaKnown RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 SALL4Q9UJQ4 1053 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 RAI2Q9Y5P3 530 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 ALG6Q9Y672 507 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 EPN1Q9Y6I3 576 aaPredicted RBP12.33□□□□□ -0.44
MSH5-216ENST00000484309 SPEGQ15772 3267 aa12.33□□□□□ -0.44
MSH5-216ENST00000484309 SCN8AQ9UQD0 1980 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 NPIPB15A6NHN6 443 aaPredicted RBP12.32□□□□□ -0.44
MSH5-216ENST00000484309 RFPL3O75679 317 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 JCHAINP01591 159 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 KRT10P13645 584 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 MX2P20592 715 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 LHCGRP22888 699 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 VIPR1P32241 457 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 HADHBP55084 474 aaKnown RBP12.32□□□□□ -0.44
MSH5-216ENST00000484309 YPEL5P62699 121 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 NIPAL4Q0D2K0 466 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 AP1B1Q10567 949 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 ZBTB17Q13105 803 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 PTK2BQ14289 1009 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 DEFB133Q30KQ1 61 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 PROX2Q3B8N5 592 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 HS1BP3Q53T59 392 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 FAXCQ5TGI0 409 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 LRRC38Q5VT99 294 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 KAZNQ674X7 775 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 KCTD16Q68DU8 428 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 MACC1Q6ZN28 852 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 RD3Q7Z3Z2 195 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 TSPAN33Q86UF1 283 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 TMTC1Q8IUR5 882 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 PELI3Q8N2H9 469 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 TSACCQ96A04 125 aaPredicted RBP12.32□□□□□ -0.44
MSH5-216ENST00000484309 IFT43Q96FT9 208 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 TSGA13Q96PP4 275 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 APOOQ9BUR5 198 aa12.32□□□□□ -0.44
MSH5-216ENST00000484309 DDX56Q9NY93 547 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms