RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 FHOD1Q9Y613 1164 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 DGKBQ9Y6T7 804 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-206ENST00000483030 AHCTF1Q8WYP5 2266 aa7.44□□□□□ -1.22
CSDE1-206ENST00000483030 KIF26BQ2KJY2 2108 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM202A6NGA9 273 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 C2CD4BA6NLJ0 364 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 B4DGG1 531 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 RASA4BC9J798 803 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 RASA4O43374 803 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 BUB1BO60566 1050 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 GADD45BO75293 160 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 LSM8O95777 96 aaKnown RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 PRKCGP05129 697 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CCL4P13236 92 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 PNLIPP16233 465 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 ALDH4A1P30038 563 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 OR1D5P58170 312 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 NOMO3P69849 1222 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 B4GALNT1Q00973 533 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 MTM1Q13496 603 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 HLTFQ14527 1009 aaKnown RBP eCLIP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 C16orf72Q14CZ0 275 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 MAN2A1Q16706 1144 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 TPD52L1Q16890 204 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 AMZ1Q400G9 498 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 C14orf28Q4W4Y0 310 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 VWA3BQ502W6 1294 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM164Q5U3C3 297 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 KLHDC7AQ5VTJ3 777 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 ERAP2Q6P179 960 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 PIM3Q86V86 326 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CAMK1DQ8IU85 385 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 LURAP1LQ8IV03 231 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 SLITRK4Q8IW52 837 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 PYROXD2Q8N2H3 581 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 RTL3Q8N8U3 475 aaKnown RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 OR56A4Q8NGH8 313 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CCL4L1Q8NHW4 92 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 JOSD2Q8TAC2 188 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 HCAR2Q8TDS4 363 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CASKIN2Q8WXE0 1202 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CENPIQ92674 756 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 FUBP1Q96AE4 644 aaKnown RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 NCAPGQ9BPX3 1015 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 FUCA2Q9BTY2 467 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 TMEM168Q9H0V1 697 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 NDST4Q9H3R1 872 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 FGF22Q9HCT0 170 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 AKAP7Q9P0M2 348 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-206ENST00000483030 KIAA1468Q9P260 1216 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 LHX3Q9UBR4 397 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 SEPT3Q9UH03 358 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 MOSPD1Q9UJG1 213 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 NEU3Q9UQ49 428 aa7.43□□□□□ -1.22
CSDE1-206ENST00000483030 CACNB4O00305 520 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 TNFRSF10CO14798 259 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 NUDT21O43809 227 aaKnown RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 RECQL5O94762 991 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 CPNE6O95741 557 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 PTMSP20962 102 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 MMP8P22894 467 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 CD82P27701 267 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 EPHB2P29323 1055 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 PTPN9P43378 593 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 HDAC4P56524 1084 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 YBEYP58557 167 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SERINC3Q13530 473 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 UBAP2LQ14157 1087 aaKnown RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 AGERQ15109 404 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 IGFBP7Q16270 282 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 CAMK4Q16566 473 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SKIDA1Q1XH10 827 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 MAP9Q49MG5 647 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 HSP90AA4PQ58FG1 418 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 MIIPQ5JXC2 388 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 CFAP58Q5T655 872 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SPECC1LQ69YQ0 1117 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 STRADAQ7RTN6 431 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SLFN11Q7Z7L1 901 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 ZSWIM9Q86XI8 627 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 DNAAF5Q86Y56 855 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 RCBTB1Q8NDN9 531 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SLC30A5Q8TAD4 765 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF564Q8TBZ8 553 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 EPS8L1Q8TE68 723 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 FAM172AQ8WUF8 416 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SLC20A1Q8WUM9 679 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 NKD1Q969G9 470 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 ZNF641Q96N77 438 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 C11orf70Q9BRQ4 267 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 LGR4Q9BXB1 951 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 NAA15Q9BXJ9 866 aaKnown RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SLC12A9Q9BXP2 914 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 ADNPQ9H2P0 1102 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SUDS3Q9H7L9 328 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 CYP4F12Q9HCS2 524 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 SPATS2LQ9NUQ6 558 aaKnown RBP7.42□□□□□ -1.22
CSDE1-206ENST00000483030 ANKMY1Q9P2S6 941 aa7.42□□□□□ -1.22
CSDE1-206ENST00000483030 UBA2Q9UBT2 640 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms