RNA–Protein interactions for RNA: ENST00000483002.1

RAB11FIP3-209, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 4

Gene RAB11FIP3, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-209ENST00000483002 KCTD16Q68DU8 428 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ZNF571Q7Z3V5 609 aaPredicted RBP16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GKN2Q86XP6 184 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NPWQ8N729 165 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KYQ8NBH2 561 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ATL2Q8NHH9 583 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 WDR36Q8NI36 951 aaKnown RBP16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PRR11Q96HE9 360 aaPredicted RBP16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 WDR92Q96MX6 357 aa16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CNOT8Q9UFF9 292 aaKnown RBP16.67■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ANKRD36A6QL64 1941 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MGAQ8IWI9 3026 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TNFSF15O95150 251 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MBD3O95983 291 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GZMAP12544 262 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 UCNP55089 124 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 POLR2LP62875 67 aaKnown RBP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 IL10RBQ08334 325 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NSUN2Q08J23 767 aaKnown RBP eCLIP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 FILIP1LQ4L180 1135 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 IGF2-ASQ6U949 168 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 LIPIQ6XZB0 460 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CYP4V2Q6ZWL3 525 aaPredicted RBP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TP53INP2Q8IXH6 220 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 COL27A1Q8IZC6 1860 aaPredicted RBP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SDR16C5Q8N3Y7 309 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ARL14Q8N4G2 192 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 LSM14AQ8ND56 463 aaKnown RBP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CCDC74AQ96AQ1 378 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ZNF653Q96CK0 615 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 DPH1Q9BZG8 443 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 AIPL1Q9NZN9 384 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CWC15Q9P013 229 aaKnown RBP16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MYO1AQ9UBC5 1043 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RABGEF1Q9UJ41 708 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PCDHGA8Q9Y5G5 932 aa16.66■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CCDC187A0A096LP49 1063 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TTC24A2A3L6 582 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CFAP69A5D8W1 941 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TMEM202A6NGA9 273 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CACNB4O00305 520 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 DDX3XO00571 662 aaKnown RBP eCLIP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NTN3O00634 580 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 LRCH4O75427 683 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 C1QL1O75973 258 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ELFN1P0C7U0 828 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SKILP12757 684 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 HCAR3P49019 387 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CCL7P80098 99 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 KLHL30Q0D2K2 578 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 SLC10A7Q0GE19 358 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RALGDSQ12967 914 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 RFTN1Q14699 578 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TAF1BQ53T94 588 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 E4F1Q66K89 784 aaPredicted RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PSTKQ8IV42 348 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 FNIP1Q8TF40 1166 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 OR1E3Q8WZA6 343 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 FUBP1Q96AE4 644 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 ECHDC3Q96DC8 303 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 PDXPQ96GD0 296 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 NSMCE3Q96MG7 304 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GFM1Q96RP9 751 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MRPL40Q9NQ50 206 aaKnown RBP16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 TMEM63CQ9P1W3 806 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 MOSPD1Q9UJG1 213 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 DGKBQ9Y6T7 804 aa16.65■□□□□ 0.26
RAB11FIP3-209ENST00000483002 GCN1Q92616 2671 aaKnown RBP16.64■□□□□ 0.26
RAB11FIP3-209ENST00000483002 CDRT15L2A8MXV6 281 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 TRAFD1O14545 582 aaPredicted RBP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 RPLP0P05388 317 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 RENBPP51606 427 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 PDX1P52945 283 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 LBRQ14739 615 aaKnown RBP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 ACOX1Q15067 660 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 DPPA4Q7L190 304 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 TAF8Q7Z7C8 310 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 B3GNT8Q7Z7M8 397 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 LZTR1Q8N653 840 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 Q8N9G6 341 aaPredicted RBP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 FAM46DQ8NEK8 389 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 OR56A4Q8NGH8 313 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 CCDC97Q96F63 343 aaPredicted RBP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 PSKH2Q96QS6 385 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 RBM15Q96T37 977 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 FOXP3Q9BZS1 431 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 ZWILCHQ9H900 591 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 EPB41L5Q9HCM4 733 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 FGF22Q9HCT0 170 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 SEPT3Q9UH03 358 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 SCINQ9Y6U3 715 aa16.64■□□□□ 0.25
RAB11FIP3-209ENST00000483002 AHCTF1Q8WYP5 2266 aa16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 HELZ2Q9BYK8 2649 aaKnown RBP16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 AMPD1P23109 780 aa16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 KELP23276 732 aa16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 PRKCIP41743 596 aa16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 ZNF135P52742 658 aaPredicted RBP16.63■□□□□ 0.25
RAB11FIP3-209ENST00000483002 KIAA1024LP59773 190 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms