RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 CES1P23141 567 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ACADVLP49748 655 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 PEX5P50542 639 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 DAB2P98082 770 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 GBE1Q04446 702 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ILKQ13418 452 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 PROX2Q3B8N5 592 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 TPRG1LQ5T0D9 272 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ARMC12Q5T9G4 340 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 DHRS13Q6UX07 377 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 LIPIQ6XZB0 460 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 CCNI2Q6ZMN8 369 aaPredicted RBP13.95□□□□□ -0.18
VARS-225ENST00000482996 MACC1Q6ZN28 852 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 TMPRSS7Q7RTY8 843 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 NDUFAF2Q8N183 169 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 CCNYQ8ND76 341 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ZNF548Q8NEK5 533 aaPredicted RBP13.95□□□□□ -0.18
VARS-225ENST00000482996 ATL2Q8NHH9 583 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 MAML1Q92585 1016 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ANP32BQ92688 251 aaKnown RBP13.95□□□□□ -0.18
VARS-225ENST00000482996 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 PANX2Q96RD6 677 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 SEMA3CQ99985 751 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 EVA1BQ9NVM1 165 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 RBM22Q9NW64 420 aaKnown RBP eCLIP13.95□□□□□ -0.185e-6■■■■■ 31.7
VARS-225ENST00000482996 NLGN3Q9NZ94 848 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 DTLQ9NZJ0 730 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 SPASTQ9UBP0 616 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 CSNK1G3Q9Y6M4 447 aa13.95□□□□□ -0.18
VARS-225ENST00000482996 ANKRD36A6QL64 1941 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 APOL1O14791 398 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 AQP9O43315 295 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 RECQL5O94762 991 aaPredicted RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 PGLSO95336 258 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 IPO7O95373 1038 aaKnown RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 LCA5LO95447 670 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 PCCBP05166 539 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 CCNB1P14635 433 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 COMTP21964 271 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 CA4P22748 312 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 HTR1BP28222 390 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 VIPR1P32241 457 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 HADHBP55084 474 aaKnown RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 TRAF2Q12933 501 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 RALGDSQ12967 914 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 EIF2B5Q13144 721 aaKnown RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 MTM1Q13496 603 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 ACOX1Q15067 660 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 SMAD1Q15797 465 aaKnown RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 USP45Q70EL2 814 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 TMTC1Q8IUR5 882 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 CCDC13Q8IYE1 715 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 LMX1AQ8TE12 382 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 HDAC11Q96DB2 347 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 TMEM121BQ9BXQ6 578 aaPredicted RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 SLC13A1Q9BZW2 595 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 KCTD5Q9NXV2 234 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 B4GALT6Q9UBX8 382 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 APOBEC3BQ9UH17 382 aaKnown RBP13.94□□□□□ -0.18
VARS-225ENST00000482996 TTLL3Q9Y4R7 772 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 RAI2Q9Y5P3 530 aa13.94□□□□□ -0.18
VARS-225ENST00000482996 A8MX80 341 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 ACP1P24666 158 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 BLKP51451 505 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 DUSP3P51452 185 aaPredicted RBP13.93□□□□□ -0.18
VARS-225ENST00000482996 PPARDQ03181 441 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 ARHGEF7Q14155 803 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 INPP5AQ14642 412 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 NFATC4Q14934 902 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 PDK1Q15118 436 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 FAXCQ5TGI0 409 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 SLC9A4Q6AI14 798 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 TMPRSS12Q86WS5 348 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 RFX6Q8HWS3 928 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 PHACTR4Q8IZ21 702 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 KDF1Q8NAX2 398 aaPredicted RBP13.93□□□□□ -0.18
VARS-225ENST00000482996 TBATAQ96M53 351 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 IL12RB2Q99665 862 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 APOOQ9BUR5 198 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 USP29Q9HBJ7 922 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 NCKIPSDQ9NZQ3 722 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 KLF15Q9UIH9 416 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 HYOU1Q9Y4L1 999 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 HEY1Q9Y5J3 304 aa13.93□□□□□ -0.18
VARS-225ENST00000482996 A0A0A6YYK5 440 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 C3orf70A6NLC5 250 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 K7ESM1 405 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 CACNB4O00305 520 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 PPP1R12AO14974 1030 aaPredicted RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 PSTPIP1O43586 416 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 HEXIM1O94992 359 aaKnown RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 JCHAINP01591 159 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 JUPP14923 745 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 HNF1BP35680 557 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 EPHB1P54762 984 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 E2F1Q01094 437 aa13.92□□□□□ -0.18
VARS-225ENST00000482996 PPIDQ08752 370 aaKnown RBP13.92□□□□□ -0.18
VARS-225ENST00000482996 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms