RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 MRPS18AQ9NVS2 196 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 P4HTMQ9NXG6 502 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 GDAP2Q9NXN4 497 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 SPASTQ9UBP0 616 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 TSPYL4Q9UJ04 414 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 CCPG1Q9ULG6 757 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FZD1Q9UP38 647 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 C15orf41Q9Y2V0 281 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 PTRH2Q9Y3E5 179 aaKnown RBP4.23□□□□□ -1.73
VPS41-212ENST00000482217 NFS1Q9Y697 457 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 TEX264Q9Y6I9 313 aa4.23□□□□□ -1.73
VPS41-212ENST00000482217 FRMD3A2A2Y4 597 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 GSAPA4D1B5 854 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 TMEM200CA6NKL6 621 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 BTBD18B2RXH4 712 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CYR61O00622 381 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 DCLK1O15075 740 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CD3EAPO15446 510 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 CACNG3O60359 315 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CDKL5O76039 1030 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SLCO2B1O94956 709 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 AKR7A3O95154 331 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 KCNK5O95279 499 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 DDAH2O95865 285 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 IL1AP01583 271 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SPARCP09486 303 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 TROVE2P10155 538 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS41-212ENST00000482217 ETS1P14921 441 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 HPGDP15428 266 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PECAM1P16284 738 aaPredicted RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 CHRM3P20309 590 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 ITGALP20701 1170 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CASTP20810 708 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 AGAP20933 346 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 DDX6P26196 483 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS41-212ENST00000482217 ALDH4A1P30038 563 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PSMC2P35998 433 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 PBX3P40426 434 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CARSP49589 748 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 CLCN4P51793 760 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 VAV2P52735 878 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 HAND2P61296 217 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 ARF5P84085 180 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SLC25A3Q00325 362 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 LIPEQ05469 1076 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 FPGSQ05932 587 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SPAG1Q07617 926 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 IL24Q13007 206 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 RESTQ13127 1097 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PDCLQ13371 301 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 GPM6BQ13491 265 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 BOP1Q14137 746 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 RPS6KA2Q15349 733 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 NFIL3Q16649 462 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 INSCQ1MX18 579 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 MGAT5BQ3V5L5 792 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 NRN1LQ496H8 165 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 MIIPQ5JXC2 388 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SFRP4Q6FHJ7 346 aaPredicted RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 ANO7Q6IWH7 933 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 KRT80Q6KB66 452 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 KLC3Q6P597 504 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 INO80CQ6PI98 192 aaPredicted RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 MICALCLQ6ZW33 695 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 DNAAF5Q86Y56 855 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PSTKQ8IV42 348 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 SLC22A9Q8IVM8 553 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CD302Q8IX05 232 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 TTC5Q8N0Z6 440 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 ZCCHC7Q8N3Z6 543 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 POC5Q8NA72 575 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 IL17RCQ8NAC3 791 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 KDM1BQ8NB78 822 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CPEB3Q8NE35 698 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 SETD6Q8TBK2 473 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CHURC1Q8WUH1 139 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CACTINQ8WUQ7 758 aaKnown RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 SNX19Q92543 992 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 LENG9Q96B70 501 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 C3orf49Q96BT1 292 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 RNF31Q96EP0 1072 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CATSPER2Q96P56 530 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 NR1H4Q96RI1 486 aaPredicted RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 OSBPL9Q96SU4 736 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PIP5K1AQ99755 562 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 GAL3ST1Q99999 423 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 C19orf43Q9BQ61 176 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 UQCC2Q9BRT2 126 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 SIKE1Q9BRV8 207 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 NUP85Q9BW27 656 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 ALOXE3Q9BYJ1 711 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 ZNF341Q9BYN7 854 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 MAGEB5Q9BZ81 275 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 GLIS2Q9BZE0 524 aaPredicted RBP4.22□□□□□ -1.73
VPS41-212ENST00000482217 TTYH3Q9C0H2 523 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 PCDHAC1Q9H158 963 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 CARD9Q9H257 536 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 XKR8Q9H6D3 395 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 MVB12BQ9H7P6 319 aa4.22□□□□□ -1.73
VPS41-212ENST00000482217 IARS2Q9NSE4 1012 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms