RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 JUNDP17535 347 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 ACP1P24666 158 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 CCNCP24863 283 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 PEX5P50542 639 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 HADHBP55084 474 aaKnown RBP17.09■□□□□ 0.33
HSPG2-209ENST00000480900 MAXP61244 160 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 SEMG2Q02383 582 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 GBE1Q04446 702 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 TRAF2Q12933 501 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 MTM1Q13496 603 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 ALG1LQ6GMV1 187 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 DHRS13Q6UX07 377 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 CCDC170Q8IYT3 715 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 BTN2A2Q8WVV5 523 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 TBATAQ96M53 351 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 ZNF830Q96NB3 372 aaPredicted RBP17.09■□□□□ 0.33
HSPG2-209ENST00000480900 RNF157Q96PX1 679 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 DUSP23Q9BVJ7 150 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 POLR1EQ9GZS1 481 aaKnown RBP17.09■□□□□ 0.33
HSPG2-209ENST00000480900 NT5MQ9NPB1 228 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 HAUS2Q9NVX0 235 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 AMACRQ9UHK6 382 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 KLF15Q9UIH9 416 aa17.09■□□□□ 0.33
HSPG2-209ENST00000480900 FREM2Q5SZK8 3169 aa17.08■□□□□ 0.33
HSPG2-209ENST00000480900 C3orf70A6NLC5 250 aaPredicted RBP17.08■□□□□ 0.32
HSPG2-209ENST00000480900 CPP00450 1065 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 CES1P23141 567 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 MAGEA1P43355 309 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 TMPRSS12Q86WS5 348 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 FAM181AQ8N9Y4 354 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 PDCD6IPQ8WUM4 868 aaKnown RBP17.08■□□□□ 0.32
HSPG2-209ENST00000480900 HDAC11Q96DB2 347 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 PANX2Q96RD6 677 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 SEMA3CQ99985 751 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 CAAP1Q9H8G2 361 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 DTLQ9NZJ0 730 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 SPASTQ9UBP0 616 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 B4GALT6Q9UBX8 382 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 PHTF1Q9UMS5 762 aa17.08■□□□□ 0.32
HSPG2-209ENST00000480900 K7ESM1 405 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ZZEF1O43149 2961 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 AQP9O43315 295 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 RECQL5O94762 991 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 PGLSO95336 258 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 MAP3K6O95382 1288 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 CCNB1P14635 433 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 DAB2P98082 770 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 SLC10A2Q12908 348 aaPredicted RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 NFATC4Q14934 902 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ARMC12Q5T9G4 340 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 SLC9A4Q6AI14 798 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 RHOT1Q8IXI2 618 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 PHACTR4Q8IZ21 702 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 PLD5Q8N7P1 536 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ATL2Q8NHH9 583 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ZCCHC14Q8WYQ9 949 aaKnown RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 APOOQ9BUR5 198 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 USP29Q9HBJ7 922 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 LUC7LQ9NQ29 371 aaKnown RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 RBM22Q9NW64 420 aaKnown RBP eCLIP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 DDX56Q9NY93 547 aaKnown RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 APOBEC3BQ9UH17 382 aaKnown RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ASPMQ8IZT6 3477 aa17.07■□□□□ 0.32
HSPG2-209ENST00000480900 URB1O60287 2271 aaKnown RBP17.07■□□□□ 0.32
HSPG2-209ENST00000480900 ZFC3H1O60293 1989 aaKnown RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 TPP1O14773 563 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 SPOPO43791 374 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 NEBLO76041 1014 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 KRT1P04264 644 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 PCCBP05166 539 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 CYP2A6P11509 494 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 CKMT1AP12532 417 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 ZFXP17010 805 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 COMTP21964 271 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 FECHP22830 423 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 HTR1BP28222 390 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 VIPR1P32241 457 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 CYLC1P35663 651 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 HNF1BP35680 557 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 BLKP51451 505 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 PPARDQ03181 441 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 ITKQ08881 620 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 INPP5AQ14642 412 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 SPA17Q15506 151 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 CCDC13Q8IYE1 715 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 RBFAQ8N0V3 343 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 LMX1AQ8TE12 382 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 APOLD1Q96LR9 279 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 COQ10AQ96MF6 247 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 MCCC1Q96RQ3 725 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 SLC13A1Q9BZW2 595 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 EVA1BQ9NVM1 165 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 KCTD5Q9NXV2 234 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 PNMA8BQ9ULN7 279 aaPredicted RBP17.06■□□□□ 0.32
HSPG2-209ENST00000480900 PPIL1Q9Y3C6 166 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 PCDHA13Q9Y5I0 950 aa17.06■□□□□ 0.32
HSPG2-209ENST00000480900 A0A0A6YYK5 440 aaPredicted RBP17.05■□□□□ 0.32
HSPG2-209ENST00000480900 A8MX80 341 aa17.05■□□□□ 0.32
HSPG2-209ENST00000480900 PSMD11O00231 422 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms