RNA–Protein interactions for RNA: ENST00000480222.1

SIK3-209, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-209ENST00000480222 ZIM3Q96PE6 472 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 MCCC1Q96RQ3 725 aaPredicted RBP12.65□□□□□ -0.38
SIK3-209ENST00000480222 GABRG3Q99928 467 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 CCDC77Q9BR77 488 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 MAGEE1Q9HCI5 957 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 ARHGEF3Q9NR81 526 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 CACNA2D2Q9NY47 1150 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
SIK3-209ENST00000480222 C5orf42Q9H799 3197 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 ZNF106Q9H2Y7 1883 aaKnown RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 EXOC1LA0A1B0GW35 172 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 MROH6A6NGR9 719 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 C2orf81A6NN90 581 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 SYNCRIPO60506 623 aaKnown RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 TCEA3O75764 348 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 SASH3O75995 380 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 CTSLP07711 333 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 ITGB7P26010 798 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 NTSR1P30989 418 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 NAB1Q13506 487 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 CAMK2GQ13555 558 aaPredicted RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 CCINQ13939 588 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 LRRC32Q14392 662 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 STARD3Q14849 445 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 FAM46CQ5VWP2 391 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 ZNF852Q6ZMS4 543 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 CAPN12Q6ZSI9 719 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 GLT6D1Q7Z4J2 308 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 UBALD2Q8IYN6 164 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 RIBC1Q8N443 379 aaPredicted RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 GABPB2Q8TAK5 448 aaPredicted RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 CDKL2Q92772 493 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 CERS2Q96G23 380 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 SHDQ96IW2 340 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 KLHL32Q96NJ5 620 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 CYTH2Q99418 400 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 TMEM109Q9BVC6 243 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 PLAC1Q9HBJ0 212 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 TREX1Q9NSU2 369 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 WNT16Q9UBV4 365 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 PPM1HQ9ULR3 514 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 MRPS17Q9Y2R5 130 aaKnown RBP12.64□□□□□ -0.39
SIK3-209ENST00000480222 PPIL1Q9Y3C6 166 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 ZNF711Q9Y462 761 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 FAM169AQ9Y6X4 670 aa12.64□□□□□ -0.39
SIK3-209ENST00000480222 SCN8AQ9UQD0 1980 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ZCWPW2A0A1B0GU75 182 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 GOLGA6L10A6NI86 522 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 UPK3BL1B0FP48 263 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 UPK3BL2E5RIL1 263 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 LDB2O43679 373 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 RNASEH1O60930 286 aaKnown RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 CYP2A6P11509 494 aaPredicted RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 PSMA3P25788 255 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 TIE1P35590 1138 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ZNF140P52738 457 aaPredicted RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 SEC13P55735 322 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ACVR1Q04771 509 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ZNF844Q08AG5 666 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 GPS2Q13227 327 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 SKIDA1Q1XH10 827 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ARSIQ5FYB1 569 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 UBAP2Q5T6F2 1119 aaKnown RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 TSTD2Q5T7W7 516 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 PDPK2PQ6A1A2 396 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ZSWIM9Q86XI8 627 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 SYNPOQ8N3V7 929 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 IL17RCQ8NAC3 791 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 PIP4K2CQ8TBX8 421 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 MFSD3Q96ES6 412 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 SCRN2Q96FV2 425 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ACOX2Q99424 681 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ROPN1BQ9BZX4 212 aaPredicted RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 MTG2Q9H4K7 406 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 ROPN1Q9HAT0 212 aaPredicted RBP12.63□□□□□ -0.39
SIK3-209ENST00000480222 PRSS16Q9NQE7 514 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 DYRK4Q9NR20 520 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 CHRAC1Q9NRG0 131 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 MOCS1Q9NZB8 636 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 RABGEF1Q9UJ41 708 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 SPO11Q9Y5K1 396 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 NFS1Q9Y697 457 aa12.63□□□□□ -0.39
SIK3-209ENST00000480222 MYO10Q9HD67 2058 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 FAM159BA6NKW6 160 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 SHISA7A6NL88 538 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 KPNA3O00505 521 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 RNF40O75150 1001 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 ADH1BP00325 375 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 SHBGP04278 402 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 PRKCGP05129 697 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 HOXB2P14652 356 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 ZNF30P17039 623 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 LPOP22079 712 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 XPAP23025 273 aaPredicted RBP12.62□□□□□ -0.39
SIK3-209ENST00000480222 NMBRP28336 390 aa12.62□□□□□ -0.39
SIK3-209ENST00000480222 HADHAP40939 763 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms