RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 PTPRN2Q92932 1015 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 CHFRQ96EP1 664 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 ZNF778Q96MU6 729 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 P2RY13Q9BPV8 354 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 C19orf43Q9BQ61 176 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 ZDHHC6Q9H6R6 413 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 C8orf33Q9H7E9 229 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 KCNK12Q9HB15 430 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 MAGEE1Q9HCI5 957 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 C20orf96Q9NUD7 363 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 THAP10Q9P2Z0 257 aaPredicted RBP12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 IL36AQ9UHA7 158 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 PHTF1Q9UMS5 762 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 COL4A2P08572 1712 aa12.02□□□□□ -0.49
TM9SF4-206ENST00000479591 SLC7A4O43246 635 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 ERVK-10P10266 1014 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 HNRNPLP14866 589 aaKnown RBP eCLIP12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 PSMA3P25788 255 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 GKP32189 559 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 ARCN1P48444 511 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 PFKPQ01813 784 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 ZNF234Q14588 700 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 TMED2Q15363 201 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 CNGA3Q16281 694 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 BRAT1Q6PJG6 821 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SERPINA13PQ6UXR4 307 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 RALGPS2Q86X27 583 aaPredicted RBP12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SLC44A3Q8N4M1 653 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 CHST14Q8NCH0 376 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 VOPP1Q96AW1 172 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 MSANTD3Q96H12 275 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 CPNE1Q99829 537 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 TMEM245Q9H330 911 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SMYD2Q9NRG4 433 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SENP1Q9P0U3 644 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 TXNDC16Q9P2K2 825 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 CTNNAL1Q9UBT7 734 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 LIMD1Q9UGP4 676 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SUN2Q9UH99 717 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 NOVA2Q9UNW9 492 aaKnown RBP12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 PPIL1Q9Y3C6 166 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 SPO11Q9Y5K1 396 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 ACTL7BQ9Y614 415 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 WASF2Q9Y6W5 498 aa12.01□□□□□ -0.49
TM9SF4-206ENST00000479591 C5orf42Q9H799 3197 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 TSPAN11A1L157 253 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CAPN8A6NHC0 703 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CXorf49A8MYA2 514 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 SPECC1L-ADORA2AF8WAN1 911 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 SIN3BO75182 1162 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 RPP40O75818 363 aaKnown RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 KRT37O76014 449 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 KRT38O76015 456 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 VAPBO95292 243 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 PRNPP04156 253 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 UGT2B4P06133 528 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 GLULP15104 373 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 LPOP22079 712 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 SLC8A1P32418 973 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CTHP32929 405 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 GP5P40197 560 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 GALK1P51570 392 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 ZNF140P52738 457 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 PRAMEP78395 509 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 ILF2Q12905 390 aaKnown RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 THOC5Q13769 683 aaKnown RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 UGP2Q16851 508 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 HSP90AA5PQ58FG0 334 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 TEDDM1Q5T9Z0 273 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 KCTD16Q68DU8 428 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 NAIF1Q69YI7 327 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 PTCRAQ6ISU1 281 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 USP45Q70EL2 814 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CNTN4Q8IWV2 1026 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 UNC5BQ8IZJ1 945 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 MDGA1Q8NFP4 955 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 OR13J1Q8NGT2 312 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CALML6Q8TD86 181 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 KCNV2Q8TDN2 545 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 OR8D1Q8WZ84 308 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 MTBPQ96DY7 904 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 MRRFQ96E11 262 aaKnown RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 LYSMD1Q96S90 227 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 FAM167BQ9BTA0 163 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 NLE1Q9NVX2 485 aaPredicted RBP12□□□□□ -0.49
TM9SF4-206ENST00000479591 DKK3Q9UBP4 350 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 SLC2A6Q9UGQ3 507 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 TBK1Q9UHD2 729 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 ZNF711Q9Y462 761 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 ARL5AQ9Y689 179 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 XIRP2A4UGR9 3374 aa12□□□□□ -0.49
TM9SF4-206ENST00000479591 CCDC78A2IDD5 438 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 LEFTY1O75610 366 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 PRKCGP05129 697 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 SNRPAP09012 282 aaKnown RBP11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 PIRTP0C851 137 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 CTPS1P17812 591 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 KRT15P19012 456 aa11.99□□□□□ -0.49
TM9SF4-206ENST00000479591 DRD1P21728 446 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms