RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 YPEL5P62699 121 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 ZNF235Q14590 738 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 NFATC4Q14934 902 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 C6orf132Q5T0Z8 1188 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 BRAT1Q6PJG6 821 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 POLNQ7Z5Q5 900 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 ZSCAN30Q86W11 494 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 BTN2A2Q8WVV5 523 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 OR1E3Q8WZA6 343 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 ZNF641Q96N77 438 aaPredicted RBP17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 DEPDC7Q96QD5 511 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 BOCQ9BWV1 1114 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 PCDH18Q9HCL0 1135 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 B4GALT6Q9UBX8 382 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 KLQ9UEF7 1012 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 MOSPD1Q9UJG1 213 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 SATB2Q9UPW6 733 aa17.48■□□□□ 0.39
ECHDC1-216ENST00000479525 EME2A4GXA9 379 aaPredicted RBP17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 TRAFD1O14545 582 aaPredicted RBP17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 ARL4AP40617 200 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 HK3P52790 923 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 SRP54P61011 504 aaKnown RBP17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 SLC25A11Q02978 314 aaKnown RBP17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 ACOX1Q15067 660 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 DPYSL2Q16555 572 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 LRRC69Q6ZNQ3 347 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 CCL4L1Q8NHW4 92 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 TUBGCP5Q96RT8 1024 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 CCDC3Q9BQI4 270 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 LGR4Q9BXB1 951 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 FGF22Q9HCT0 170 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 MRPL47Q9HD33 250 aaKnown RBP17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 SALL4Q9UJQ4 1053 aa17.47■□□□□ 0.39
ECHDC1-216ENST00000479525 ZFC3H1O60293 1989 aaKnown RBP17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 LMO7DNF2Z398 122 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 RASGRP1O95267 797 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 PEX11BO96011 259 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 GYPCP04921 128 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 MYBL1P10243 752 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 CTPS1P17812 591 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 CDH6P55285 790 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 TRAF2Q12933 501 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 GRM3Q14832 879 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 TBC1D25Q3MII6 688 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 TMCO4Q5TGY1 634 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 TMCO3Q6UWJ1 677 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 FGF11Q92914 225 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 ECHDC3Q96DC8 303 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 TRIM11Q96F44 468 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 WDR92Q96MX6 357 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 PACSIN1Q9BY11 444 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 EDEM3Q9BZQ6 932 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 NOD2Q9HC29 1040 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 SEPT3Q9UH03 358 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 PADI4Q9UM07 663 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 ENTPD2Q9Y5L3 495 aa17.46■□□□□ 0.39
ECHDC1-216ENST00000479525 UNC13CQ8NB66 2214 aa17.46■□□□□ 0.38
ECHDC1-216ENST00000479525 PTPRQQ9UMZ3 2332 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GOLGA6CA6NDK9 693 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GOLGA6BA6NDN3 693 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 MFSD11O43934 449 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 SERPING1P05155 500 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GP1BAP07359 652 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GOLGA6DP0CG33 693 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 CASP14P31944 242 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 PCK1P35558 622 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 CSNK1DP48730 415 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 KRT81Q14533 505 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 CNGA3Q16281 694 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 ISXQ2M1V0 245 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 FIGNQ5HY92 759 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 RFLNAQ6ZTI6 216 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 DPPA4Q7L190 304 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 TSPAN33Q86UF1 283 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 ATPAF2Q8N5M1 289 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 SNIP1Q8TAD8 396 aaKnown RBP17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 PTCD2Q8WV60 388 aaKnown RBP17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 CCDC74AQ96AQ1 378 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 LGMNQ99538 433 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 NT5MQ9NPB1 228 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 WDR70Q9NW82 654 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GOLGA6AQ9NYA3 693 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 DONSONQ9NYP3 566 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 GPR34Q9UPC5 381 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 SCN8AQ9UQD0 1980 aa17.45■□□□□ 0.38
ECHDC1-216ENST00000479525 TMEM110-MUSTN1A8MSY1 372 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 EIF3CLB5ME19 914 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 TPP1O14773 563 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 RRP8O43159 456 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 MAFKO60675 156 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 CPP00450 1065 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 ACTN2P35609 894 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 HCAR3P49019 387 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 PDX1P52945 283 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 TPM4P67936 248 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 MTM1Q13496 603 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 B3GNT8Q7Z7M8 397 aa17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 PSTKQ8IV42 348 aaKnown RBP17.44■□□□□ 0.38
ECHDC1-216ENST00000479525 SPACA3Q8IXA5 215 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms