RNA–Protein interactions for RNA: ENST00000478048.5

CBWD3-206, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-206ENST00000478048 BRAT1Q6PJG6 821 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 KBTBD6Q86V97 674 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 KLHDC8BQ8IXV7 354 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 LPCAT1Q8NF37 534 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 PRSS33Q8NF86 280 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 OR14C36Q8NHC7 312 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 GRK7Q8WTQ7 553 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 SLCO2A1Q92959 643 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 TOE1Q96GM8 510 aaKnown RBP11.52□□□□□ -0.56
CBWD3-206ENST00000478048 APOL2Q9BQE5 337 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 RAB6BQ9NRW1 208 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 VPS45Q9NRW7 570 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 WSB2Q9NYS7 404 aaPredicted RBP11.52□□□□□ -0.56
CBWD3-206ENST00000478048 NCKAP1Q9Y2A7 1128 aa11.52□□□□□ -0.56
CBWD3-206ENST00000478048 FANCMQ8IYD8 2048 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FAM47DPA6NHR8 397 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 A8MX80 341 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 UPK3BL1B0FP48 263 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 UPK3BL2E5RIL1 263 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 USP12O75317 370 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 ANXA9O76027 345 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 CPP00450 1065 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 AGTP01019 485 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 ALPIP09923 528 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 CTPS1P17812 591 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 CD6P30203 668 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 CDK18Q07002 472 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 TCF15Q12870 199 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 GPS1Q13098 491 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 PRPSAP1Q14558 356 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 PPP1R7Q15435 360 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 SLC14A2Q15849 920 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 USP39Q53GS9 565 aaKnown RBP11.52□□□□□ -0.57
CBWD3-206ENST00000478048 JAMLQ86YT9 394 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 HCAR2Q8TDS4 363 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 TRIM51Q9BSJ1 452 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FICDQ9BVA6 458 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FAM126AQ9BYI3 521 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-206ENST00000478048 BTBD1Q9H0C5 482 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 PCDH12Q9NPG4 1184 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 EVA1BQ9NVM1 165 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 ZSCAN32Q9NX65 697 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FEZ2Q9UHY8 353 aaPredicted RBP11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FZD4Q9ULV1 537 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 PHTF1Q9UMS5 762 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 AAR2Q9Y312 384 aaKnown RBP11.52□□□□□ -0.57
CBWD3-206ENST00000478048 FADS3Q9Y5Q0 445 aa11.52□□□□□ -0.57
CBWD3-206ENST00000478048 CEP192Q8TEP8 1941 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 THADAQ6YHU6 1953 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 VPS13AQ96RL7 3174 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 LRRK1Q38SD2 2015 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 LOC285095A0A1B0GVY8 99 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 PRR23AA6NEV1 266 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 AREL1O15033 823 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 RAD51CO43502 376 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 PLRG1O43660 514 aaKnown RBP11.51□□□□□ -0.57
CBWD3-206ENST00000478048 GAS8O95995 478 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 ATXN1LP0C7T5 689 aaKnown RBP11.51□□□□□ -0.57
CBWD3-206ENST00000478048 PIRTP0C851 137 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 CA4P22748 312 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 ADRA1AP35348 466 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 FDFT1P37268 417 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 EPHB1P54762 984 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 SH3BP2P78314 561 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 BASP1P80723 227 aaKnown RBP11.51□□□□□ -0.57
CBWD3-206ENST00000478048 DR1Q01658 176 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 SEMA5AQ13591 1074 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 PTK6Q13882 451 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 QPCTQ16769 361 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 SLC25A41Q8N5S1 370 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 DEFB119Q8N690 84 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 ZBTB44Q8NCP5 570 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 RMDN1Q96DB5 314 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 IFT43Q96FT9 208 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 FEM1CQ96JP0 617 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 CARD6Q9BX69 1037 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 GPR174Q9BXC1 333 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 C6orf106Q9H6K1 298 aaPredicted RBP11.51□□□□□ -0.57
CBWD3-206ENST00000478048 PPIL1Q9Y3C6 166 aa11.51□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3DA0A087WVF3 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3IA0A087WXS9 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3EA0A087X179 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3KA0A087X1G2 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 A0A0J9YYE9 177 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 A0A1W2PQ67 120 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TCRBV7S3A2A0A539 114 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3FA6NER0 549 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 ANKRD66B4E2M5 251 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3LB9A6J9 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SLC7A4O43246 635 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 RPP40O75818 363 aaKnown RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 SEMA4FO95754 770 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 AP2A1O95782 977 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 NDST3O95803 873 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TRBC1P01850 177 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 TBC1D3HP0C7X1 549 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 XPAP23025 273 aaPredicted RBP11.5□□□□□ -0.57
CBWD3-206ENST00000478048 GRIA1P42261 906 aa11.5□□□□□ -0.57
CBWD3-206ENST00000478048 POLR2LP62875 67 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms