RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 OR6K2Q8NGY2 324 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 KIAA1524Q8TCG1 905 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 CXorf40AQ8TE69 158 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 ISG20Q96AZ6 181 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 SNRNP40Q96DI7 357 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 KLHL32Q96NJ5 620 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 USP28Q96RU2 1077 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 WRAP53Q9BUR4 548 aaKnown RBP7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC25A23Q9BV35 468 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 TM6SF2Q9BZW4 377 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 RUBCNLQ9H714 662 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 SLAMF7Q9NQ25 335 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 LUZP4Q9P127 313 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 CROTQ9UKG9 612 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 PCDHGA6Q9Y5G7 932 aa7.37□□□□□ -1.23
SPTLC1-205ENST00000477888 NYNRINQ9P2P1 1898 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 CXorf51AA0A1B0GTR3 108 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PIPSLA2A3N6 862 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ANKUB1A6NFN9 424 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 I6L893 689 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 KRIT1O00522 736 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 POLR1CO15160 346 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 INPP4BO15327 924 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PPP6R2O75170 966 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ADCY5O95622 1261 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 POP4O95707 220 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 CALCAP01258 141 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 HOXC4P09017 264 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 CCNB1P14635 433 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 NR2F2P24468 414 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 NFKBIAP25963 317 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PSMC2P35998 433 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MXI1P50539 228 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 YWHAEP62258 255 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MTA1Q13330 715 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 STILQ15468 1287 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ZRSR2Q15696 482 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MYLK3Q32MK0 819 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 EFHC1Q5JVL4 640 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM270Q6UE05 265 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF783Q6ZMS7 281 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 LYSMD3Q7Z3D4 306 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 TMEM110Q86TL2 294 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MMP21Q8N119 569 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 NAGSQ8N159 534 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PLA2G15Q8NCC3 412 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ZDHHC1Q8WTX9 485 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PTCD2Q8WV60 388 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PNPLA2Q96AD5 504 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MED15Q96RN5 788 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 BARD1Q99728 777 aaKnown RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 SPON2Q9BUD6 331 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 OSBPL1AQ9BXW6 950 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 TWSG1Q9GZX9 223 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 SIK2Q9H0K1 926 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 THAP9Q9H5L6 903 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 MAGEF1Q9HAY2 307 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ANLNQ9NQW6 1124 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ST7Q9NRC1 585 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ASF1BQ9NVP2 202 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 DDIT4Q9NX09 232 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 FAM13BQ9NYF5 915 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 RRN3Q9NYV6 651 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 RCOR3Q9P2K3 495 aaPredicted RBP7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF212Q9UDV6 495 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 COQ6Q9Y2Z9 468 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 COQ4Q9Y3A0 265 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 PCDHGB7Q9Y5F8 929 aa7.36□□□□□ -1.23
SPTLC1-205ENST00000477888 TACC2O95359 2948 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 IGLV3-10A0A075B6K4 115 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 SYNJ2BP-COX16A0A087WUM0 186 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ILVBLA1L0T0 632 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 A8MU76 341 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CALUO43852 315 aaPredicted RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 LRCH4O75427 683 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 KATNA1O75449 491 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CEACAM4O75871 244 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 FUCA1P04066 466 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ZNF28P17035 718 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 BRD2P25440 801 aaKnown RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ITGA3P26006 1051 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 OR1E1P30953 314 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 TRIM23P36406 574 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 STAT1P42224 750 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ACADSBP45954 432 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 KIAA1024LP59773 190 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 RNASE9P60153 205 aaKnown RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 GPLD1P80108 840 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CDK17Q00537 523 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 MTM1Q13496 603 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CBWD6Q4V339 395 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CBWD3Q5JTY5 395 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 CBWD5Q5RIA9 395 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 SLC6A19Q695T7 634 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 ANKRD40Q6AI12 368 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 SHC4Q6S5L8 630 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 C6orf15Q6UXA7 325 aaPredicted RBP7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 GDPD4Q6W3E5 623 aa7.35□□□□□ -1.23
SPTLC1-205ENST00000477888 TFAP2DQ7Z6R9 452 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms