RNA–Protein interactions for RNA: ENST00000477625.5

PTPN7-210, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-210ENST00000477625 HAUS2Q9NVX0 235 aa12.3□□□□□ -0.44
PTPN7-210ENST00000477625 NLGN3Q9NZ94 848 aa12.3□□□□□ -0.44
PTPN7-210ENST00000477625 AMACRQ9UHK6 382 aa12.3□□□□□ -0.44
PTPN7-210ENST00000477625 PHTF1Q9UMS5 762 aa12.3□□□□□ -0.44
PTPN7-210ENST00000477625 CSNK1G3Q9Y6M4 447 aa12.3□□□□□ -0.44
PTPN7-210ENST00000477625 K7ESM1 405 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 NEBLO76041 1014 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 RECQL5O94762 991 aaPredicted RBP12.29□□□□□ -0.44
PTPN7-210ENST00000477625 PGLSO95336 258 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 CPP00450 1065 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 CCNB1P14635 433 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 CES1P23141 567 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 NFKBIAP25963 317 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 HTR1BP28222 390 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 NOP2P46087 812 aaKnown RBP12.29□□□□□ -0.44
PTPN7-210ENST00000477625 HADHBP55084 474 aaKnown RBP12.29□□□□□ -0.44
PTPN7-210ENST00000477625 PPARDQ03181 441 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 TRAF2Q12933 501 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 SPA17Q15506 151 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 ARMC12Q5T9G4 340 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 SLC9A4Q6AI14 798 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 ALG1LQ6GMV1 187 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 MACC1Q6ZN28 852 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 TMPRSS12Q86WS5 348 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 RHOT1Q8IXI2 618 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 PLD5Q8N7P1 536 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 FAM181AQ8N9Y4 354 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 CCNYQ8ND76 341 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 LMX1AQ8TE12 382 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 HDAC11Q96DB2 347 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 SCRN2Q96FV2 425 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 PANX2Q96RD6 677 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 SEMA3CQ99985 751 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 APOOQ9BUR5 198 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 RBM22Q9NW64 420 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTPN7-210ENST00000477625 DDX56Q9NY93 547 aaKnown RBP12.29□□□□□ -0.44
PTPN7-210ENST00000477625 DTLQ9NZJ0 730 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 SPASTQ9UBP0 616 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 B4GALT6Q9UBX8 382 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 PCDHA13Q9Y5I0 950 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 RAI2Q9Y5P3 530 aa12.29□□□□□ -0.44
PTPN7-210ENST00000477625 TPP1O14773 563 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 APOL1O14791 398 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 AQP9O43315 295 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 KRT1P04264 644 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 PCCBP05166 539 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 CKMT1AP12532 417 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 COMTP21964 271 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 VIPR1P32241 457 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 CYLC1P35663 651 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 BLKP51451 505 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 DAB2P98082 770 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 MTM1Q13496 603 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 ACOX1Q15067 660 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 ODF2Q5BJF6 829 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 FAXCQ5TGI0 409 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 GAS2L3Q86XJ1 694 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 MARCH9Q86YJ5 346 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 CCDC13Q8IYE1 715 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 PHACTR4Q8IZ21 702 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 NDUFAF2Q8N183 169 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 CBARPQ8N350 705 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 PLA2G15Q8NCC3 412 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 TPCN2Q8NHX9 752 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 LRRN4Q8WUT4 740 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 RNF25Q96BH1 459 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 APOLD1Q96LR9 279 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 TBATAQ96M53 351 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 COQ10AQ96MF6 247 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 ZNF830Q96NB3 372 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 LGMNQ99538 433 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 SLC13A1Q9BZW2 595 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 TCEAL2Q9H3H9 227 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 LUC7LQ9NQ29 371 aaKnown RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 APOBEC3BQ9UH17 382 aaKnown RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 ZMIZ1Q9ULJ6 1067 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 PNMA8BQ9ULN7 279 aaPredicted RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 PPIL1Q9Y3C6 166 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 HYOU1Q9Y4L1 999 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 OR1A2Q9Y585 309 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 HEY1Q9Y5J3 304 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 ALG6Q9Y672 507 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 TDRD6O60522 2096 aaKnown RBP12.28□□□□□ -0.44
PTPN7-210ENST00000477625 WDFY3Q8IZQ1 3526 aa12.28□□□□□ -0.44
PTPN7-210ENST00000477625 USP24Q9UPU5 2620 aa12.27□□□□□ -0.44
PTPN7-210ENST00000477625 ANKRD36A6QL64 1941 aa12.27□□□□□ -0.44
PTPN7-210ENST00000477625 PTPRBP23467 1997 aa12.27□□□□□ -0.44
PTPN7-210ENST00000477625 IGF2RP11717 2491 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-210ENST00000477625 FAM149AA5PLN7 773 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 SPOPO43791 374 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 FZD6O60353 706 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 GCATO75600 419 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 HEXIM1O94992 359 aaKnown RBP12.27□□□□□ -0.45
PTPN7-210ENST00000477625 CAPNS1P04632 268 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 PDHA1P08559 390 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 CYP2A6P11509 494 aaPredicted RBP12.27□□□□□ -0.45
PTPN7-210ENST00000477625 KRT10P13645 584 aa12.27□□□□□ -0.45
PTPN7-210ENST00000477625 TNNT1P13805 278 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms