RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 CPEB1Q9BZB8 566 aaKnown RBP17■□□□□ 0.31
EPHB4-204ENST00000477446 NOD2Q9HC29 1040 aa17■□□□□ 0.31
EPHB4-204ENST00000477446 SCUBE2Q9NQ36 999 aa17■□□□□ 0.31
EPHB4-204ENST00000477446 EXOC1LA0A1B0GW35 172 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 C5orf60A6NFR6 353 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 SPAG6O75602 509 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 STK10O94804 968 aaKnown RBP16.99■□□□□ 0.31
EPHB4-204ENST00000477446 PRNPP04156 253 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 C7P10643 843 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 MAGEA6P43360 314 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 PXNP49023 591 aaPredicted RBP16.99■□□□□ 0.31
EPHB4-204ENST00000477446 METAP1P53582 386 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 AP1S1P61966 158 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 NIPAL4Q0D2K0 466 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 IHHQ14623 411 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 CST6Q15828 149 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 RASSF3Q86WH2 238 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 PGBD3Q8N328 593 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 CCDC110Q8TBZ0 833 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 SIPA1Q96FS4 1042 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 CHMP6Q96FZ7 201 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 LRFN3Q9BTN0 628 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 GLOD4Q9HC38 313 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 EURLQ9NYK6 297 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 TRHDEQ9UKU6 1024 aa16.99■□□□□ 0.31
EPHB4-204ENST00000477446 ATXN2Q99700 1313 aaKnown RBP16.99■□□□□ 0.31
EPHB4-204ENST00000477446 PIGNO95427 931 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 SLC8A1P32418 973 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 MAPK8P45983 427 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 PSMD8P48556 350 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 SLC18A1P54219 525 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 KLHL38Q2WGJ6 581 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 POM121L1PQ3SYA9 428 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 RALGPS1Q5JS13 557 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 FOXR1Q6PIV2 292 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 KIAA1324Q6UXG2 1013 aaKnown RBP16.98■□□□□ 0.31
EPHB4-204ENST00000477446 PALM2Q8IXS6 379 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 LRIG1Q96JA1 1093 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 SPATA13Q96N96 652 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 TUBGCP5Q96RT8 1024 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 VPS37BQ9H9H4 285 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 EBF1Q9UH73 591 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 C1QTNF3-AMACRE9PGA6 284 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 KPNA3O00505 521 aaPredicted RBP16.98■□□□□ 0.31
EPHB4-204ENST00000477446 MID1O15344 667 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 GCATO75600 419 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 ADH1BP00325 375 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 DNTTP04053 509 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 UGT2B4P06133 528 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 MMP2P08253 660 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 TDGF1P13385 188 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 NFKB1P19838 968 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 CES1P23141 567 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 HOXA6P31267 233 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 SEC24CP53992 1094 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 BASP1P80723 227 aaKnown RBP16.98■□□□□ 0.31
EPHB4-204ENST00000477446 CSTF1Q05048 431 aaKnown RBP16.98■□□□□ 0.31
EPHB4-204ENST00000477446 DMWDQ09019 674 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 GRM3Q14832 879 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 GDPD4Q6W3E5 623 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 CAMK1DQ8IU85 385 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 MDM1Q8TC05 714 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 IMP4Q96G21 291 aaKnown RBP16.98■□□□□ 0.31
EPHB4-204ENST00000477446 SLC25A51Q9H1U9 297 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 ATP13A3Q9H7F0 1226 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 PCDHGC4Q9Y5F7 938 aa16.98■□□□□ 0.31
EPHB4-204ENST00000477446 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.97■□□□□ 0.31
EPHB4-204ENST00000477446 F5H423 210 aaPredicted RBP16.97■□□□□ 0.31
EPHB4-204ENST00000477446 OPHN1O60890 802 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 C5AR1P21730 350 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 CD86P42081 329 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 ZBTB16Q05516 673 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 BCL2L1Q07817 233 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 KCNJ11Q14654 390 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 CCDC38Q502W7 563 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 FAM46CQ5VWP2 391 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 ANKRD22Q5VYY1 191 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 ARHGEF18Q6ZSZ5 1173 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 CPLX4Q7Z7G2 160 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 PRPF39Q86UA1 669 aaKnown RBP16.97■□□□□ 0.31
EPHB4-204ENST00000477446 MCUQ8NE86 351 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 SPATA22Q8NHS9 363 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 LRRC39Q96DD0 335 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 KLHL32Q96NJ5 620 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 FCRL5Q96RD9 977 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 OSBPL1AQ9BXW6 950 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 TPSD1Q9BZJ3 242 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 GBA3Q9H227 469 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 SUV39H2Q9H5I1 410 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 FBXO4Q9UKT5 387 aa16.97■□□□□ 0.31
EPHB4-204ENST00000477446 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.97■□□□□ 0.31
EPHB4-204ENST00000477446 EML5Q05BV3 1969 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ZNF318Q5VUA4 2279 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 TRAFD1O14545 582 aaPredicted RBP16.96■□□□□ 0.31
EPHB4-204ENST00000477446 SERPINF2P08697 491 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 GSTA2P09210 222 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ACADMP11310 421 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 BRAFP15056 766 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 SERPINA4P29622 427 aa16.96■□□□□ 0.31
EPHB4-204ENST00000477446 ZNF805Q5CZA5 627 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms