RNA–Protein interactions for RNA: ENST00000476558.7

CCDC7-206, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 1,819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-206ENST00000476558 OR51F1A6NGY5 319 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 GOT2P00505 430 aaKnown RBP23.13■■□□□ 1.29
CCDC7-206ENST00000476558 SERPINE1P05121 402 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 SBK3P0C264 359 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 SAT1P21673 171 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 RHOAP61586 193 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 PRSS36Q5K4E3 855 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 RBM20Q5T481 1227 aaKnown RBP23.13■■□□□ 1.29
CCDC7-206ENST00000476558 RETSATQ6NUM9 610 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 LEMD2Q8NC56 503 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 CDKN2AIPNLQ96HQ2 116 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 ELMO2Q96JJ3 720 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 ADGRE3Q9BY15 652 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 DCTN4Q9UJW0 460 aa23.13■■□□□ 1.29
CCDC7-206ENST00000476558 INTS6Q9UL03 887 aaKnown RBP23.13■■□□□ 1.29
CCDC7-206ENST00000476558 TARM1B6A8C7 271 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 K7ERQ8 282 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 BUD23O43709 281 aaKnown RBP23.12■■□□□ 1.29
CCDC7-206ENST00000476558 DCTN3O75935 186 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 APOA4P06727 396 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 GRK2P25098 689 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 AVPR1AP37288 418 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 CD70P32970 193 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 MAGEA9P43362 315 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 CSNK1DP48730 415 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 ILF2Q12905 390 aaKnown RBP23.12■■□□□ 1.29
CCDC7-206ENST00000476558 PLEKHG6Q3KR16 790 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 PNPLA1Q8N8W4 532 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 GPATCH11Q8N954 259 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 RDH11Q8TC12 318 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 KCTD4Q8WVF5 259 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 LRRC37BQ96QE4 947 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 OLFM1Q99784 485 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 ABCB8Q9NUT2 735 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 MYO7AQ13402 2215 aa23.12■■□□□ 1.29
CCDC7-206ENST00000476558 CHD9Q3L8U1 2897 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 CD3EAPO15446 510 aaKnown RBP23.11■■□□□ 1.29
CCDC7-206ENST00000476558 SMAD6O43541 496 aaKnown RBP23.11■■□□□ 1.29
CCDC7-206ENST00000476558 ITM2AO43736 263 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 KLHL2O95198 593 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 GLP2RO95838 553 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 RALBP11234 206 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 AP1S1P61966 158 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 DLG1Q12959 904 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 ZNF460Q14592 562 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 HSF5Q4G112 596 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-206ENST00000476558 ARHGAP15Q53QZ3 475 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 ATXN7L2Q5T6C5 722 aaPredicted RBP23.11■■□□□ 1.29
CCDC7-206ENST00000476558 ATG14Q6ZNE5 492 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 LPCAT1Q8NF37 534 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 OR4L1Q8NH43 312 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 SMIM14Q96QK8 99 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 MYLK2Q9H1R3 596 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 TDP1Q9NUW8 608 aa23.11■■□□□ 1.29
CCDC7-206ENST00000476558 RUVBL2Q9Y230 463 aaKnown RBP23.11■■□□□ 1.29
CCDC7-206ENST00000476558 A0A087X1B8 175 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 A0A0G2JND7 137 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 ZNF821O75541 412 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 WISP3O95389 354 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 PENKP01210 267 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 POU2F2P09086 479 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 OGNP20774 298 aaKnown RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 ARRB2P32121 409 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SLC1A6P48664 564 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 ARFIP2P53365 341 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SLC20A2Q08357 652 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SEMA3AQ14563 771 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 GLT6D1Q7Z4J2 308 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 LDB1Q86U70 411 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 CRLF3Q8IUI8 442 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 TMEM120AQ9BXJ8 343 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 NUMBLQ9Y6R0 609 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 PALM2-AKAP2B1ALY0 433 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 XYLBO75191 536 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 DNAJC8O75937 253 aaPredicted RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 CYBBP04839 570 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SLC8A1P32418 973 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SETDB1Q15047 1291 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SPDYAQ5MJ70 313 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 HECTD2Q5U5R9 776 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 PDE12Q6L8Q7 609 aaKnown RBP23.1■■□□□ 1.29
CCDC7-206ENST00000476558 MRNIPQ6NTE8 343 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 OR4K2Q8NGD2 314 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 PPP1R14CQ8TAE6 165 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 SORT1Q99523 831 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 NDNQ99608 321 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 OXSMQ9NWU1 459 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 ZDHHC7Q9NXF8 308 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 KCNK4Q9NYG8 393 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 MID2Q9UJV3 735 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 VWA7Q9Y334 891 aa23.1■■□□□ 1.29
CCDC7-206ENST00000476558 GRXCR1A8MXD5 290 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 NTHL1P78549 312 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 ITGA9Q13797 1035 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 TYSND1Q2T9J0 566 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 FAM109BQ6ICB4 259 aaPredicted RBP23.09■■□□□ 1.29
CCDC7-206ENST00000476558 ZYG11AQ6WRX3 759 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 METTL3Q86U44 580 aaKnown RBP23.09■■□□□ 1.29
CCDC7-206ENST00000476558 TMEM25Q86YD3 366 aa23.09■■□□□ 1.29
CCDC7-206ENST00000476558 FSTL5Q8N475 847 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms