RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 CSF3RQ99062 836 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 HGH1Q9BTY7 390 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TRIM8Q9BZR9 551 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 VTA1Q9NP79 307 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 BCAP29Q9UHQ4 241 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 PADI4Q9UM07 663 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ZNF839A8K0R7 811 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 HACD1B0YJ81 288 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TMEM233B4DJY2 109 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 JAK1P23458 1154 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 MATKP42679 507 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 SLC26A2P50443 739 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 YBX1P67809 324 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 LSM12Q3MHD2 195 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 SLC25A52Q3SY17 297 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 NHSL2Q5HYW2 709 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 CERCAMQ5T4B2 595 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 NXNQ6DKJ4 435 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TTC33Q6PID6 262 aaPredicted RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 CHSY3Q70JA7 882 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ZDHHC17Q8IUH5 632 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 HERC6Q8IVU3 1022 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 DEFB106AQ8N104 65 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 PARP8Q8N3A8 854 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ANKK1Q8NFD2 765 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 UROC1Q96N76 676 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 FERMT1Q9BQL6 677 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 OSBPL2Q9H1P3 480 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GOLGA2P5Q9HBQ8 144 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 VPS28Q9UK41 221 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 CPQQ9Y646 472 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TCAF2A6NFQ2 919 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 KCNK1O00180 336 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TOMM70O94826 608 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 MYO1DO94832 1006 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 SLC35E2BP0CK96 405 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TXNP10599 105 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 CYP2B6P20813 491 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GRK2P25098 689 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 PCYT1AP49585 367 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 SNX16P57768 344 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 BSPRYQ5W0U4 402 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GK5Q6ZS86 529 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 MOB2Q70IA6 237 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GPRIN1Q7Z2K8 1008 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 ARRDC4Q8NCT1 418 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 SLC2A14Q8TDB8 520 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 RNF139Q8WU17 664 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 PTCD2Q8WV60 388 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 TMEM40Q8WWA1 233 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 SLC2A13Q96QE2 648 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 RNF39Q9H2S5 420 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 NXF3Q9H4D5 531 aaKnown RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 CHRAC1Q9NRG0 131 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 GID8Q9NWU2 228 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 CDH7Q9ULB5 785 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 MKL2Q9ULH7 1088 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 MAGED2Q9UNF1 606 aaPredicted RBP8.43□□□□□ -1.06
VAPB-205ENST00000476395 AP4S1Q9Y587 144 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 TRPM7Q96QT4 1865 aa8.43□□□□□ -1.06
VAPB-205ENST00000476395 FAM25EA8MYX2 175 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CLDN5O00501 218 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 JRKO75564 520 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 BCAS2O75934 225 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 BMP10O95393 424 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MYL4P12829 197 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ME2P23368 584 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ADORA2BP29275 332 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 HPCAL1P37235 193 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 GP5P40197 560 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 TNFAIP2Q03169 654 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 BST2Q10589 180 aaKnown RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 NAB1Q13506 487 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ACAP2Q15057 778 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CCDC153Q494R4 210 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CCBE1Q6UXH8 406 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 KCTD8Q6ZWB6 473 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CEP97Q8IW35 865 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 PELI3Q8N2H9 469 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CBR4Q8N4T8 237 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 SH3RF2Q8TEC5 729 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 FAR2Q96K12 515 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 CPNE1Q99829 537 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ABCG4Q9H172 646 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 TCF7L2Q9NQB0 619 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ERAP1Q9NZ08 941 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 DKK3Q9UBP4 350 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MTF2Q9Y483 593 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 PCDHGA8Q9Y5G5 932 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 TLL2Q9Y6L7 1015 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 KCNU1A8MYU2 1149 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 C9IYK1 514 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 E7ENX8 843 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
VAPB-205ENST00000476395 BAIAP3O94812 1187 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 PGK1P00558 417 aa8.42□□□□□ -1.06
VAPB-205ENST00000476395 MT-ND1P03886 318 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms