RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 AP4S1Q9Y587 144 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 COL2A1P02458 1487 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 DNAJC25-GNG10A0A024R161 153 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 E7ENX8 843 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TMX2-CTNND1H3BSU7 103 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CLOCKO15516 846 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PLA2G6O60733 806 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ABHD2P08910 425 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CNPP09543 421 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ZFXP17010 805 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 IL10P22301 178 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 HNF4AP41235 474 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GDF5P43026 501 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CD151P48509 253 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 NT5C2P49902 561 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MTPNP58546 118 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 POU4F1Q01851 419 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 RIPK1Q13546 671 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PARP6Q2NL67 630 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 C9orf57Q5W0N0 161 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TLDC1Q6P9B6 456 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 RNF180Q86T96 592 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 OSTM1Q86WC4 334 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 NPWQ8N729 165 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CANT1Q8WVQ1 401 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SIGLEC10Q96LC7 697 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FBXL18Q96ME1 805 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 DACH2Q96NX9 599 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 OLFM3Q96PB7 478 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ADAM2Q99965 735 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FOXP3Q9BZS1 431 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 USP29Q9HBJ7 922 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GGA2Q9UJY4 613 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FBXO5Q9UKT4 447 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 USP22Q9UPT9 525 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MAGED1Q9Y5V3 778 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ARL5AQ9Y689 179 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 BPTFQ12830 3046 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 HEATR9A2RTY3 570 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 J3KR12 359 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SLC2A4P14672 509 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PTPN3P26045 913 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PSMB9P28065 219 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GKP32189 559 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MS4A2Q01362 244 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GNA12Q03113 381 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FPGSQ05932 587 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CDH17Q12864 832 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 BOP1Q14137 746 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SIM2Q14190 667 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CPSF6Q16630 551 aaKnown RBP eCLIP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CYP27C1Q4G0S4 372 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SLC44A4Q53GD3 710 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PPP4R4Q6NUP7 873 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SPESP1Q6UW49 350 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MAMDC4Q6UXC1 1216 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 DHFR2Q86XF0 187 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PSTKQ8IV42 348 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 C12orf56Q8IXR9 622 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 RAVER1Q8IY67 606 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 EZH1Q92800 747 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GLMNQ92990 594 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FAM162AQ96A26 154 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 RMND5BQ96G75 393 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GORASP1Q9BQQ3 440 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 GPR63Q9BZJ6 419 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 CDH19Q9H159 772 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 LIMD1Q9UGP4 676 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 TNFSF13BQ9Y275 285 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ARAP2Q8WZ64 1704 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 A0A1W2PQ45 241 aaPredicted RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 A0A1W2PQY0 241 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 BOLA2-SMG1P6H3BVE0 249 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 HDAC3O15379 428 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 HS6ST1O60243 411 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SYNCRIPO60506 623 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PEX14O75381 377 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MTX2O75431 263 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PAGE1O75459 146 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SPAG6O75602 509 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MTA2O94776 668 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 AHSGP02765 367 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 HOXD10P28358 340 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 AKT1P31749 480 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FDFT1P37268 417 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SLC1A2P43004 574 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 SEPHS1P49903 392 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 DGKQP52824 942 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 ADARP55265 1226 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 WNT3AP56704 352 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 NAA20P61599 178 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 FAM189BP81408 668 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 KCNJ11Q14654 390 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 MORN1Q5T089 497 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 PTRHD1Q6GMV3 140 aaKnown RBP5.01□□□□□ -1.61
CCDC39-204ENST00000476379 OVOS1Q6IE37 1185 aa5.01□□□□□ -1.61
CCDC39-204ENST00000476379 IL27RAQ6UWB1 636 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms