RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 RANBP9Q96S59 729 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 MRPL57Q9BQC6 102 aaKnown RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SPON2Q9BUD6 331 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 POLR1EQ9GZS1 481 aaKnown RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SSX2IPQ9Y2D8 614 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 VWA7Q9Y334 891 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 F5H5T6 163 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SCAMP3O14828 347 aaKnown RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 AIM2O14862 343 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 LIN7AO14910 233 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 KLKB1P03952 638 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 COX4I1P13073 169 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 ARSAP15289 507 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 ATP5C1P36542 298 aaKnown RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 SGSHP51688 502 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 ATN1P54259 1190 aaPredicted RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 PRKAA1Q13131 559 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 ZNF235Q14590 738 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 CALML6Q8TD86 181 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 IFT43Q96FT9 208 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 DNAJC1Q96KC8 554 aaKnown RBP16.72■□□□□ 0.27
TVP23B-202ENST00000476139 TNFRSF12AQ9NP84 129 aa16.72■□□□□ 0.27
TVP23B-202ENST00000476139 A0A087X1B8 175 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 PRSS56P0CW18 603 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 ITGAXP20702 1163 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 NAIF1Q69YI7 327 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-202ENST00000476139 NXNQ6DKJ4 435 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 LCA5Q86VQ0 697 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 PDFQ9HBH1 243 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 PCDH10Q9P2E7 1040 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 DNMT3LQ9UJW3 386 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 MIA3Q5JRA6 1907 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 PAPSS2O95340 614 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-202ENST00000476139 RGRP47804 291 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 YBEYP58557 167 aaPredicted RBP16.71■□□□□ 0.27
TVP23B-202ENST00000476139 ASPHQ12797 758 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 FAM83EQ2M2I3 478 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 SH2D4BQ5SQS7 431 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 GPR158Q5T848 1215 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 TMCO4Q5TGY1 634 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 IRGCQ6NXR0 463 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 KDM1BQ8NB78 822 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 VN1R3Q9BXE9 311 aa16.71■□□□□ 0.27
TVP23B-202ENST00000476139 H7C4K7 107 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 SLC7A4O43246 635 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 ACSL4O60488 711 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 SEC24AO95486 1093 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 SLC4A1P02730 911 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 HOXD9P28356 352 aaPredicted RBP16.71■□□□□ 0.26
TVP23B-202ENST00000476139 CCNIQ14094 377 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 SEMA3AQ14563 771 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.26
TVP23B-202ENST00000476139 FSCBQ5H9T9 825 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 TECRLQ5HYJ1 363 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 METTL21CQ5VZV1 264 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 ISLR2Q6UXK2 745 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.71■□□□□ 0.261e-7■■■■□ 23.8
TVP23B-202ENST00000476139 RNF148Q8N7C7 305 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 UBXN10Q96LJ8 280 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.71■□□□□ 0.26
TVP23B-202ENST00000476139 NCKIPSDQ9NZQ3 722 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 CDH22Q9UJ99 828 aa16.71■□□□□ 0.26
TVP23B-202ENST00000476139 GREB1Q4ZG55 1949 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 COCHO43405 550 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 GOT2P00505 430 aaKnown RBP16.7■□□□□ 0.26
TVP23B-202ENST00000476139 MAPKAPK2P49137 400 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 ALDH7A1P49419 539 aaKnown RBP16.7■□□□□ 0.26
TVP23B-202ENST00000476139 GNA12Q03113 381 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 TNK2Q07912 1038 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 TBL3Q12788 808 aaKnown RBP16.7■□□□□ 0.26
TVP23B-202ENST00000476139 WBP2Q969T9 261 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 CATSPER2Q96P56 530 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 RNF38Q9H0F5 515 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 MFSD1Q9H3U5 465 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 S100A14Q9HCY8 104 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 EME2A4GXA9 379 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-202ENST00000476139 ZNF840PA6NDX5 716 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 TSPAN8P19075 237 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 SCNN1BP51168 640 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 PRICKLE1Q96MT3 831 aaPredicted RBP16.7■□□□□ 0.26
TVP23B-202ENST00000476139 SCOCQ9UIL1 159 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 ADAMTS6Q9UKP5 1117 aa16.7■□□□□ 0.26
TVP23B-202ENST00000476139 TSPAN3O60637 253 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 LTA4HP09960 611 aaKnown RBP16.69■□□□□ 0.26
TVP23B-202ENST00000476139 ATP5F1P24539 256 aaPredicted RBP16.69■□□□□ 0.26
TVP23B-202ENST00000476139 ELAVL2Q12926 359 aaKnown RBP16.69■□□□□ 0.26
TVP23B-202ENST00000476139 CDC16Q13042 620 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 AGAP9Q5VTM2 703 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 TMCO2Q7Z6W1 182 aaPredicted RBP16.69■□□□□ 0.26
TVP23B-202ENST00000476139 CYP2S1Q96SQ9 504 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 ECSITQ9BQ95 431 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 EBF3Q9H4W6 596 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 POMPQ9Y244 141 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 CCDC162PA2VCL2 907 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 A8MT66 165 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 H3BNC9 293 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 CFLARO15519 480 aa16.69■□□□□ 0.26
TVP23B-202ENST00000476139 SMIM24O75264 130 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms