RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SUV39H2Q9H5I1 410 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 SUDS3Q9H7L9 328 aaPredicted RBP14.09□□□□□ -0.15
CCDC78-209ENST00000474647 TAB2Q9NYJ8 693 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 IL17BQ9UHF5 180 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 ACSL6Q9UKU0 697 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 PCDHGA4Q9Y5G9 962 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 RNF215Q9Y6U7 377 aa14.09□□□□□ -0.15
CCDC78-209ENST00000474647 FLNCQ14315 2725 aa14.08□□□□□ -0.15
CCDC78-209ENST00000474647 TMEM202A6NGA9 273 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CACNB4O00305 520 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 NVLO15381 856 aaKnown RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CCP110O43303 1012 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 ITGB2P05107 769 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 GLB1P16278 677 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CHRNB2P17787 502 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 RFC1P35251 1148 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 NSFP46459 744 aaKnown RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 YBEYP58557 167 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CYP4F2P78329 520 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 GRM3Q14832 879 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CYTH1Q15438 398 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 NFKBIBQ15653 356 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 PARP15Q460N3 678 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 C14orf28Q4W4Y0 310 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CERCAMQ5T4B2 595 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 OR56A4Q8NGH8 313 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 OR1E3Q8WZA6 343 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CENPIQ92674 756 aaPredicted RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 USP7Q93009 1102 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CMKLR1Q99788 373 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 DPEP2Q9H4A9 486 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 CATSPERBQ9H7T0 1116 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 FGF22Q9HCT0 170 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 NLRC4Q9NPP4 1024 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 SEPT11Q9NVA2 429 aaKnown RBP14.08□□□□□ -0.16
CCDC78-209ENST00000474647 FOXJ2Q9P0K8 574 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 LRIT1Q9P2V4 623 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 ATP8A1Q9Y2Q0 1164 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 PCDHB11Q9Y5F2 797 aa14.08□□□□□ -0.16
CCDC78-209ENST00000474647 TSPAN11A1L157 253 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 ELFN1P0C7U0 828 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 KLK7P49862 253 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 POLR2FP61218 127 aaKnown RBP14.07□□□□□ -0.16
CCDC78-209ENST00000474647 SPECC1LQ69YQ0 1117 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 BRAT1Q6PJG6 821 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 WDR59Q6PJI9 974 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 TRIM72Q6ZMU5 477 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 ATG14Q6ZNE5 492 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 TMPRSS9Q7Z410 1059 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 ZSWIM9Q86XI8 627 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 CAMK1DQ8IU85 385 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 JPH3Q8WXH2 748 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-209ENST00000474647 FUBP1Q96AE4 644 aaKnown RBP14.07□□□□□ -0.16
CCDC78-209ENST00000474647 TMEM159Q96B96 161 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 TMEM168Q9H0V1 697 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 GANQ9H2C0 597 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 CYP4F12Q9HCS2 524 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 FAM207AQ9NSI2 230 aaPredicted RBP14.07□□□□□ -0.16
CCDC78-209ENST00000474647 SAMSN1Q9NSI8 373 aaKnown RBP14.07□□□□□ -0.16
CCDC78-209ENST00000474647 STARD5Q9NSY2 213 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 ADAM22Q9P0K1 906 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 DACH1Q9UI36 760 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 APPL1Q9UKG1 709 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 DGKBQ9Y6T7 804 aa14.07□□□□□ -0.16
CCDC78-209ENST00000474647 A8MX80 341 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 C9orf172C9J069 976 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 J3KR12 359 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 BUB1BO60566 1050 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 RECQL5O94762 991 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 SERPINA4P29622 427 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 SOX5P35711 763 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 KIAA1024LP59773 190 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 TPI1P60174 286 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 ZFP36L1Q07352 338 aaKnown RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 HLTFQ14527 1009 aaKnown RBP eCLIP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 AGERQ15109 404 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 SYCP1Q15431 976 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 TBR1Q16650 682 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 AMZ1Q400G9 498 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 TCP11X2Q5H9J9 407 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 C3orf20Q8ND61 904 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 CCL4L1Q8NHW4 92 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 HCAR2Q8TDS4 363 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 CELF6Q96J87 481 aaKnown RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 ZNF641Q96N77 438 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 MCEEQ96PE7 176 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 VPS16Q9H269 839 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 SEMA6CQ9H3T2 930 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 ATP13A3Q9H7F0 1226 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 RDH14Q9HBH5 336 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 AKAP7Q9P0M2 348 aaPredicted RBP14.06□□□□□ -0.16
CCDC78-209ENST00000474647 FZD10Q9ULW2 581 aa14.06□□□□□ -0.16
CCDC78-209ENST00000474647 ANKRD62A6NC57 917 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 TERTO14746 1132 aaKnown RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 FGF10O15520 208 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 TEX33O43247 280 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 PPFIA2O75334 1257 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 CALB1P05937 261 aa14.05□□□□□ -0.16
CCDC78-209ENST00000474647 UNGP13051 313 aaPredicted RBP14.05□□□□□ -0.16
CCDC78-209ENST00000474647 PNLIPP16233 465 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms