RNA–Protein interactions for RNA: ENST00000474528.5

SFXN5-211, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 4,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-211ENST00000474528 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 SCD5Q86SK9 330 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 ST13P4Q8IZP2 240 aaPredicted RBP11.72□□□□□ -0.53
SFXN5-211ENST00000474528 NAT16Q8N8M0 369 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 PCYOX1LQ8NBM8 494 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 MTFMTQ96DP5 389 aaKnown RBP11.72□□□□□ -0.53
SFXN5-211ENST00000474528 OLFM3Q96PB7 478 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 C1orf50Q9BV19 199 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 WDR41Q9HAD4 459 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 PRKAG3Q9UGI9 489 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 TLR6Q9Y2C9 796 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 DTNAQ9Y4J8 743 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 ATAD5Q96QE3 1844 aa11.72□□□□□ -0.53
SFXN5-211ENST00000474528 MTMR11A4FU01 709 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 SIX3O95343 332 aaPredicted RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 MC4RP32245 332 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 DSG1Q02413 1049 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 CAPRIN1Q14444 709 aaKnown RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 NR6A1Q15406 480 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 TRIP4Q15650 581 aaPredicted RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 LSM12Q3MHD2 195 aaKnown RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 THEMIS2Q5TEJ8 643 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ANKS6Q68DC2 871 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 IYDQ6PHW0 289 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 HERC6Q8IVU3 1022 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 LRRC43Q8N309 656 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 EVLQ9UI08 416 aaPredicted RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 MRASO14807 208 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ITGBL1O95965 494 aaPredicted RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 KCNK10P57789 538 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ARMC12Q5T9G4 340 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 TXNDC8Q6A555 127 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ZNF534Q76KX8 674 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 TTC30BQ8N4P2 665 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 TRIML2Q8N7C3 387 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 CDYL2Q8N8U2 506 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ARNTL2Q8WYA1 636 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 PBXIP1Q96AQ6 731 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 ASB8Q9H765 288 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.71□□□□□ -0.53
SFXN5-211ENST00000474528 RAI2Q9Y5P3 530 aa11.71□□□□□ -0.53
SFXN5-211ENST00000474528 LOXHD1Q8IVV2 1947 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 A0A087X1B8 175 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 CCDC162PA2VCL2 907 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 UBXN8O00124 270 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 PSMD12O00232 456 aaPredicted RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 FFAR3O14843 346 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 GPR42O15529 346 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 BCL2L1Q07817 233 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 INSCQ1MX18 579 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 LPCAT4Q643R3 524 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 PIWIL4Q7Z3Z4 852 aaKnown RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 SETD3Q86TU7 594 aaPredicted RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 ZNF598Q86UK7 904 aaKnown RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 CUZD1Q86UP6 607 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 TSC22D3Q99576 134 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 MRPL17Q9NRX2 175 aaKnown RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 SLCO1B7G3V0H7 640 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 ENPP3O14638 875 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 SYN3O14994 580 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 ZBTB14O43829 449 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 HIST1H2AGP0C0S8 130 aaPredicted RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 FGF3P11487 239 aaPredicted RBP11.71□□□□□ -0.54
SFXN5-211ENST00000474528 HIST1H2ADP20671 130 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 SLC18A1P54219 525 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 CYP4F8P98187 520 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 SIRPB2Q5JXA9 342 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 METTL6Q8TCB7 284 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 GDPD5Q8WTR4 605 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 RTP4Q96DX8 246 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 HIST1H2AHQ96KK5 128 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 GPR21Q99679 349 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 HIST1H2AJQ99878 128 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 H2AFJQ9BTM1 129 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 HGH1Q9BTY7 390 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 ZDHHC6Q9H6R6 413 aa11.71□□□□□ -0.54
SFXN5-211ENST00000474528 ITGALP20701 1170 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 NFKBIAP25963 317 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 HCAR3P49019 387 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 RALGDSQ12967 914 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.7□□□□□ -0.54
SFXN5-211ENST00000474528 MBLAC2Q68D91 279 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 SLC22A9Q8IVM8 553 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 MIER2Q8N344 545 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 FNDC5Q8NAU1 212 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 BHLHE22Q8NFJ8 381 aaPredicted RBP11.7□□□□□ -0.54
SFXN5-211ENST00000474528 FBXO27Q8NI29 283 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 FUBP3Q96I24 572 aaKnown RBP eCLIP11.7□□□□□ -0.54
SFXN5-211ENST00000474528 VPS45Q9NRW7 570 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 NMRK1Q9NWW6 199 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 TRIP11Q15643 1979 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 TTC3P53804 2025 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 DLX3O60479 287 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 GJB3O75712 270 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 GLDCP23378 1020 aa11.7□□□□□ -0.54
SFXN5-211ENST00000474528 HSPA14Q0VDF9 509 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms