RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 TBC1D13Q9NVG8 400 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 THUMPD1Q9NXG2 353 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 NYAP2Q9P242 653 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 IGSF9Q9P2J2 1179 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ADAMTS5Q9UNA0 930 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 PCDHB5Q9Y5E4 795 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 POMT1Q9Y6A1 747 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TEX264Q9Y6I9 313 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 C2orf92A0A1B0GVN3 265 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 MARCH11A6NNE9 402 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TTLL8A6PVC2 850 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 POLRMTO00411 1230 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 KHNYNO15037 678 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 ANGPT2O15123 496 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 KCNAB3O43448 404 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 KCNQ3O43525 872 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 BCAS1O75363 584 aaPredicted RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 GNAI2P04899 355 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 GP1BAP07359 652 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ESRRAP11474 423 aaPredicted RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 MSX1P28360 303 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 SERPINB5P36952 375 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CAPGP40121 348 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 SLC1A4P43007 532 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ERVFC1P60507 584 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ALDH6A1Q02252 535 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 MGAT5Q09328 741 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CLCA4Q14CN2 919 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 MEP1BQ16820 701 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TTC38Q5R3I4 469 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 FAXCQ5TGI0 409 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 BSPRYQ5W0U4 402 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 RAET1GQ6H3X3 334 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ZPBP2Q6X784 338 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 NDUFAF7Q7L592 441 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CDR2LQ86X02 465 aaPredicted RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 RASAL3Q86YV0 1011 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 LINC00346Q8IVM7 164 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TAGAPQ8N103 731 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 RP9Q8TA86 221 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 ZNF596Q8TC21 504 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 FAM71BQ8TC56 605 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CPT1CQ8TCG5 803 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 BTN2A2Q8WVV5 523 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 TAMM41Q96BW9 452 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 SIPA1Q96FS4 1042 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 SERAC1Q96JX3 654 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 PHACTR3Q96KR7 559 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 DUSP26Q9BV47 211 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 CACNG6Q9BXT2 260 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 DERL2Q9GZP9 239 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ACTR5Q9H9F9 607 aaPredicted RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 OBP2BQ9NPH6 170 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 GJB4Q9NTQ9 266 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 DDX43Q9NXZ2 648 aaKnown RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 SPASTQ9UBP0 616 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 OGDHLQ9ULD0 1010 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 ATXN7L1Q9ULK2 861 aaPredicted RBP3.51□□□□□ -1.85
UBR3-208ENST00000474426 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.51□□□□□ -1.85
UBR3-208ENST00000474426 CA14Q9ULX7 337 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 RAD54BQ9Y620 910 aa3.51□□□□□ -1.85
UBR3-208ENST00000474426 FAM227AF5H4B4 570 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 O00370 1275 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PEX10O60683 326 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 UGDHO60701 494 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 FKTNO75072 461 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 N4BP1O75113 896 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZFPL1O95159 310 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 F9P00740 461 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EPOP01588 193 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 APOC1P02654 83 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 AMHP03971 560 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 CKMP06732 381 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 H2AFB2P0C5Z0 115 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GFAPP14136 432 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NCF2P19878 526 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 CYP2C18P33260 490 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 EIF2DP41214 584 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 AP2S1P53680 142 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 SOX8P57073 446 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SELENOVP59797 346 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 KCNJ2P63252 427 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PSPHP78330 225 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 SRSF5Q13243 272 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 CEBPEQ15744 281 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TBCEQ15813 527 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 MPEG1Q2M385 716 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 GAB4Q2WGN9 574 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 TWISTNBQ3B726 338 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZNF468Q5VIY5 522 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 CES3Q6UWW8 571 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PXKQ7Z7A4 578 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 PATL1Q86TB9 770 aaKnown RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 BIVMQ86UB2 503 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 C12orf40Q86WS4 652 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 ZBED8Q8IZ13 594 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 NAGSQ8N159 534 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 FAM181AQ8N9Y4 354 aa3.5□□□□□ -1.85
UBR3-208ENST00000474426 MARCH10Q8NA82 808 aaPredicted RBP3.5□□□□□ -1.85
UBR3-208ENST00000474426 MLKLQ8NB16 471 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms