RNA–Protein interactions for RNA: ENST00000474319.1

LSS-208, Transcript of lanosterol synthase, human

TSL 2

Gene LSS, Length 3,601 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSS-208	ENST00000474319	PQBP1	O60828	265 aa	Known RBP	10.79	□□□□□ -0.68
LSS-208	ENST00000474319	PARN	O95453	639 aa	Known RBP	10.79	□□□□□ -0.68
LSS-208	ENST00000474319	HLA-DQB2	P05538	268 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	IKBKE	Q14164	716 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	CLEC14A	Q86T13	490 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	ZNF410	Q86VK4	478 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM151A	Q8N4L1	468 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	MARVELD2	Q8N4S9	558 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	C3orf58	Q8NDZ4	430 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	SOCS4	Q8WXH5	440 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	BTBD9	Q96Q07	612 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	C1QTNF1	Q9BXJ1	281 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	SLC39A8	Q9C0K1	460 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	MID1IP1	Q9NPA3	183 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	CACNA2D2	Q9NY47	1150 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	ST3GAL5	Q9UNP4	418 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	ACTL7A	Q9Y615	435 aa		10.79	□□□□□ -0.68
LSS-208	ENST00000474319	BOLA2-SMG1P6	H3BVE0	249 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	BCAS2	O75934	225 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	SRP72	O76094	671 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TOMM70	O94826	608 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	GFAP	P14136	432 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ATP6V1B2	P21281	511 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	CCR1	P32246	355 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DAOA	P59103	153 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	STX1B	P61266	288 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	HPCA	P84074	193 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	BTBD8	Q5XKL5	378 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	PKN3	Q6P5Z2	889 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DHFR2	Q86XF0	187 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ZMIZ2	Q8NF64	920 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	MAGEE2	Q8TD90	523 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	STYX	Q8WUJ0	223 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	HDAC10	Q969S8	669 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	VPS50	Q96JG6	964 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	EXOC2	Q96KP1	924 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	NAA50	Q9GZZ1	169 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	CREBZF	Q9NS37	354 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	PRPF19	Q9UMS4	504 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	PAPPA2	Q9BXP8	1791 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319		A8MT66	165 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TPD52L2	O43399	206 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TMCC1	O94876	653 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ALOX15	P16050	662 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	GGT5	P36269	586 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	VEGFB	P49765	207 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ATP1A4	Q13733	1029 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TRIM25	Q14258	630 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	GRM2	Q14416	872 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	GRB7	Q14451	532 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DCAF4L1	Q3SXM0	396 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	SV2C	Q496J9	727 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	RABL3	Q5HYI8	236 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	HMGCLL1	Q8TB92	370 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	SPPL2B	Q8TCT7	592 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM74	Q96NL1	305 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	CROT	Q9UKG9	612 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	RRN3P2	A6NIE6	340 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	XPOT	O43592	962 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ARNT	P27540	789 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	PBX3	P40426	434 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	ARSD	P51689	593 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DSC2	Q02487	901 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	MYBPC3	Q14896	1274 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	CHSY3	Q70JA7	882 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DEFB128	Q7Z7B8	93 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	CRYBG2	Q8N1P7	616 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	LRRC52	Q8N7C0	313 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	TMEM102	Q8N9M5	508 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	RIN3	Q8TB24	985 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	GLT1D1	Q96MS3	346 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	MRPS26	Q9BYN8	205 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	LTB4R2	Q9NPC1	389 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319	DNAAF2	Q9NVR5	837 aa	Known RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	MARCH4	Q9P2E8	410 aa	Predicted RBP	10.78	□□□□□ -0.68
LSS-208	ENST00000474319	FBXW11	Q9UKB1	542 aa		10.78	□□□□□ -0.68
LSS-208	ENST00000474319		A0A0J9YVX5	310 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319		A0A1B0GTL3	188 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	UBXN8	O00124	270 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	PIR	O00625	290 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	UBFD1	O14562	309 aa	Known RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	ACOT8	O14734	319 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	CASQ2	O14958	399 aa	Predicted RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	SOAT2	O75908	522 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	TBX18	O95935	607 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	SNRPB2	P08579	225 aa	Known RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	DARS	P14868	501 aa	Known RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	OXTR	P30559	389 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	WNT3A	P56704	352 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	PURA	Q00577	322 aa	Known RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	PAFAH1B3	Q15102	231 aa	Known RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	C14orf80	Q86SX3	495 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	RALGPS2	Q86X27	583 aa	Predicted RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	PAF1	Q8N7H5	531 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	FCRL2	Q96LA5	508 aa	Predicted RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.77	□□□□□ -0.68
LSS-208	ENST00000474319	MIOS	Q9NXC5	875 aa		10.77	□□□□□ -0.68
LSS-208	ENST00000474319	PTTG2	Q9NZH5	202 aa		10.77	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms