RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 HS1BP3Q53T59 392 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 MACC1Q6ZN28 852 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 PHACTR4Q8IZ21 702 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 ZCCHC14Q8WYQ9 949 aaKnown RBP18.02■□□□□ 0.48
UPF3A-203ENST00000474056 SPOCK2Q92563 424 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 MAML1Q92585 1016 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 RNF157Q96PX1 679 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 HYOU1Q9Y4L1 999 aa18.02■□□□□ 0.48
UPF3A-203ENST00000474056 CFAP69A5D8W1 941 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 NEMP2A6NFY4 417 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 C3orf70A6NLC5 250 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-203ENST00000474056 K7ESM1 405 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 AQP9O43315 295 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 KRT37O76014 449 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 RECQL5O94762 991 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-203ENST00000474056 ALPPL2P10696 532 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 MYF5P13349 255 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 CCNCP24863 283 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 ITKQ08881 620 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 INPP5AQ14642 412 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 RALGPS1Q5JS13 557 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 TIGD7Q6NT04 549 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-203ENST00000474056 NYAP1Q6ZVC0 841 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 PLD5Q8N7P1 536 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 PLA2G15Q8NCC3 412 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 LMX1AQ8TE12 382 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 APOLD1Q96LR9 279 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 SEMA3CQ99985 751 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 APOOQ9BUR5 198 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 DTLQ9NZJ0 730 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 APOBEC3BQ9UH17 382 aaKnown RBP18.01■□□□□ 0.47
UPF3A-203ENST00000474056 OR1A2Q9Y585 309 aa18.01■□□□□ 0.47
UPF3A-203ENST00000474056 COL27A1Q8IZC6 1860 aaPredicted RBP18.01■□□□□ 0.47
UPF3A-203ENST00000474056 LY6G6EA0A0G2JKS1 128 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 A0A1W2PQ67 120 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 MATN3O15232 486 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 KRT1P04264 644 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 CAPNS1P04632 268 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 TNNT1P13805 278 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 MAGEA1P43355 309 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 ZNF75DP51815 510 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 DSC2Q02487 901 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 MTM1Q13496 603 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 C1orf61Q13536 156 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 CAMK2BQ13554 666 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 TCEAL1Q15170 157 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 CNGA3Q16281 694 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 DEFB133Q30KQ1 61 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 PRRT3Q5FWE3 981 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 HES3Q5TGS1 186 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 PELI3Q8N2H9 469 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 BTN2A2Q8WVV5 523 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 HDAC11Q96DB2 347 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 TSGA13Q96PP4 275 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 LRRC61Q9BV99 259 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 DUSP23Q9BVJ7 150 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 POLR1EQ9GZS1 481 aaKnown RBP18■□□□□ 0.47
UPF3A-203ENST00000474056 PHTF1Q9UMS5 762 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 TFR2Q9UP52 801 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 TTLL3Q9Y4R7 772 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 RAI2Q9Y5P3 530 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 CSNK1G3Q9Y6M4 447 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 U3KQA8 63 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 APC2O95996 2303 aa18■□□□□ 0.47
UPF3A-203ENST00000474056 ZFC3H1O60293 1989 aaKnown RBP17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ZNF487B1APH4 448 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 GCATO75600 419 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PGLSO95336 258 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 LCA5LO95447 670 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 HLA-DQB2P05538 268 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PDHA1P08559 390 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 CDK4P11802 303 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 CKMT1AP12532 417 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 MX2P20592 715 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 COMTP21964 271 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 LHCGRP22888 699 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 VIPR1P32241 457 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PEX5P50542 639 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PPARDQ03181 441 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ILKQ13418 452 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 IHHQ14623 411 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 NFATC4Q14934 902 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PTPRRQ15256 657 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ARMC12Q5T9G4 340 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 FAXCQ5TGI0 409 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 SLC9A4Q6AI14 798 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ALG1LQ6GMV1 187 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ENPP7Q6UWV6 458 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 TMPRSS12Q86WS5 348 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 GAS2L3Q86XJ1 694 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 CCDC13Q8IYE1 715 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.99■□□□□ 0.47
UPF3A-203ENST00000474056 FAM181AQ8N9Y4 354 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 MDM1Q8TC05 714 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 PIH1D2Q8WWB5 315 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 FATE1Q969F0 183 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 TSACCQ96A04 125 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-203ENST00000474056 MRFAP1L1Q96HT8 127 aa17.99■□□□□ 0.47
UPF3A-203ENST00000474056 RBM22Q9NW64 420 aaKnown RBP eCLIP17.99■□□□□ 0.472e-10■■■■■ 44.4
UPF3A-203ENST00000474056 SPASTQ9UBP0 616 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms