RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 C5orf60A6NFR6 353 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 PGRMC1O00264 195 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 LZTS3O60299 673 aaPredicted RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 FZD6O60353 706 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 OPHN1O60890 802 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 ELFN1P0C7U0 828 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 TCP1P17987 556 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 HNRNPA2B1P22626 353 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 CD38P28907 300 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 STIP1P31948 543 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 VIPR1P32241 457 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 ACTN2P35609 894 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 CSNK1EP49674 416 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 C21orf59P57076 290 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 RPL26P61254 145 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 IRX4P78413 519 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 CDK18Q07002 472 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 ARHGEF7Q14155 803 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 IHHQ14623 411 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 SLC14A2Q15849 920 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 CCNG2Q16589 344 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 DPPA4Q7L190 304 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 KIAA2013Q8IYS2 634 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 RASGEF1CQ8N431 466 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 C1orf216Q8TAB5 229 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 MS4A14Q96JA4 679 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 WDR24Q96S15 920 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 NAPGQ99747 312 aaPredicted RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 ORAI3Q9BRQ5 295 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 C1QTNF2Q9BXJ5 285 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 FSD1LQ9BXM9 530 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 HOMER3Q9NSC5 361 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 RPL26L1Q9UNX3 145 aaKnown RBP12.47□□□□□ -0.41
DDX56-209ENST00000473924 SLCO1B1Q9Y6L6 691 aa12.47□□□□□ -0.41
DDX56-209ENST00000473924 PLXNA2O75051 1894 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 GON4LQ3T8J9 2241 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 DMDP11532 3685 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 USP34Q70CQ2 3546 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 TRPM6Q9BX84 2022 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 A0A0J9YYE9 177 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ANKRD66B4E2M5 251 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 C10orf142B7Z368 130 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ANXA9O76027 345 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 PRLP01236 227 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 IFNB1P01574 187 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 TRBC1P01850 177 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 SYPP08247 313 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ALPIP09923 528 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 C6P13671 934 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 TGM1P22735 817 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 PSMB4P28070 264 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 HNF1BP35680 557 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 GRIA4P48058 902 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ATXN3P54252 364 aaPredicted RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 GEMP55040 296 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 GDF10P55107 478 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 RALGDSQ12967 914 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 MPP3Q13368 585 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 GALNT3Q14435 633 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ACOX1Q15067 660 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 SIX1Q15475 284 aaPredicted RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 OASLQ15646 514 aaKnown RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 DENND2CQ68D51 928 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 LIPIQ6XZB0 460 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 CCDC89Q8N998 374 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 IPMKQ8NFU5 416 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 COG1Q8WTW3 980 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 ASB12Q8WXK4 309 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 TADA1Q96BN2 335 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 LRRC45Q96CN5 670 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 PPP1R2P1Q96PQ5 205 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 MLPHQ9BV36 600 aaPredicted RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 GTPBP2Q9BX10 602 aaKnown RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 FSCN3Q9NQT6 498 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 COQ6Q9Y2Z9 468 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 AAR2Q9Y312 384 aaKnown RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 PPIL1Q9Y3C6 166 aa12.46□□□□□ -0.41
DDX56-209ENST00000473924 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.46□□□□□ -0.41
DDX56-209ENST00000473924 OTOGLQ3ZCN5 2332 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 A0A1B0GVT2 93 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 GOLGA6CA6NDK9 693 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 GOLGA6BA6NDN3 693 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 CAPN8A6NHC0 703 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 NPIPB15A6NHN6 443 aaPredicted RBP12.45□□□□□ -0.42
DDX56-209ENST00000473924 GOLGA8CPA6NN73 597 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 CES2O00748 559 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 ARHGAP33O14559 1287 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 FPGTO14772 594 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 WNT9AO14904 365 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 MAGEC1O60732 1142 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 GCATO75600 419 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 NDST3O95803 873 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 ITGAVP06756 1048 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 GOLGA6DP0CG33 693 aa12.45□□□□□ -0.42
DDX56-209ENST00000473924 ENGP17813 658 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms