RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CXCR3P49682 368 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 HLCSP50747 726 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 KCNK10P57789 538 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ZNF470Q6ECI4 717 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 TAF2Q6P1X5 1199 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PAOXQ6QHF9 649 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 S100ZQ8WXG8 99 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 FATE1Q969F0 183 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ZNF668Q96K58 619 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 MYRFLQ96LU7 910 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 TDRD1Q9BXT4 1180 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 PAIP1Q9H074 479 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 DPEP3Q9H4B8 488 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ANLNQ9NQW6 1124 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PIGVQ9NUD9 493 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 COX16Q9P0S2 106 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 AURKCQ9UQB9 309 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 FADS3Q9Y5Q0 445 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 WDR90Q96KV7 1748 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ZNF236Q9UL36 1845 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 A0A0J9YYE9 177 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 STX16-NPEPL1H3BU86 382 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 UBXN8O00124 270 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GABRDO14764 452 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PFDN6O15212 129 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 MATN3O15232 486 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 DEAF1O75398 565 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 TIPRLO75663 272 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 BCL10O95999 233 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PGK1P00558 417 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 HPRP00739 348 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 VTNP04004 478 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PCSK1P29120 753 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 LEPRP48357 1165 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 NDST2P52849 883 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 TAS2R39P59534 338 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CSHL1Q14406 222 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GRIK4Q16099 956 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GEN1Q17RS7 908 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 RGS21Q2M5E4 152 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 TTC23Q5W5X9 447 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CBR4Q8N4T8 237 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 SNX31Q8N9S9 440 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GIPC2Q8TF65 315 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CYGBQ8WWM9 190 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 IL12RB2Q99665 862 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 FICDQ9BVA6 458 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 COLEC11Q9BWP8 271 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 WDR12Q9GZL7 423 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 ATAD3AQ9NVI7 634 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 RIC8BQ9NVN3 520 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 OR12D3Q9UGF7 316 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 TUBGCP4Q9UGJ1 667 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 MAGEL2Q9UJ55 1249 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 LEF1Q9UJU2 399 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 MGAMO43451 1857 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 RECQL4O94761 1208 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 NCAM1P13591 858 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PCSK2P16519 638 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 SLC1A2P43004 574 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 RPS9P46781 194 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 SERPINB10P48595 397 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GABARAPL2P60520 117 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 HERVK_113P63132 956 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ARHGAP1Q07960 439 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CCDC92Q53HC0 331 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 C6orf10Q5SRN2 563 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PM20D1Q6GTS8 502 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ZNF773Q6PK81 442 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ALKAL1Q6UXT8 129 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CYP2R1Q6VVX0 501 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 LARP4Q71RC2 724 aaKnown RBP eCLIP6.14□□□□□ -1.435e-6■■■■□ 23.2
HERC4-209ENST00000473533 FBXO16Q8IX29 292 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 ZNF513Q8N8E2 541 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 PAPD5Q8NDF8 572 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 IPMKQ8NFU5 416 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 DQX1Q8TE96 717 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 CANT1Q8WVQ1 401 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 MARK4Q96L34 752 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CCDC138Q96M89 665 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 GPATCH1Q9BRR8 931 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 NPLQ9BXD5 320 aaPredicted RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 ERVK-6Q9BXR3 956 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 PCDHAC1Q9H158 963 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 POLR1BQ9H9Y6 1135 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 ARNT2Q9HBZ2 717 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 SYTL2Q9HCH5 934 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 HPS4Q9NQG7 708 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 CHST12Q9NRB3 414 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 IGSF5Q9NSI5 407 aa6.14□□□□□ -1.43
HERC4-209ENST00000473533 DUS2Q9NX74 493 aaKnown RBP6.14□□□□□ -1.43
HERC4-209ENST00000473533 SYCE1LA8MT33 242 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 CFAP99D6REC4 459 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 H3BRB1 525 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 FBP2O00757 339 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 SUPT7LO94864 414 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 GFAPP14136 432 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 TPH1P17752 444 aa6.13□□□□□ -1.43
HERC4-209ENST00000473533 MSX2P35548 267 aaPredicted RBP6.13□□□□□ -1.43
HERC4-209ENST00000473533 ARCN1P48444 511 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms