RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 DEF6Q9H4E7 631 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 TBC1D17Q9HA65 648 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 PRMT7Q9NVM4 692 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 ARGLU1Q9NWB6 273 aaPredicted RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 STEAP1Q9UHE8 339 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 COG5Q9UP83 839 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 REXO2Q9Y3B8 237 aaKnown RBP2.74□□□□□ -1.97
XRN1-210ENST00000472697 TEX264Q9Y6I9 313 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 SESN1Q9Y6P5 492 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 MAST1Q9Y2H9 1570 aa2.74□□□□□ -1.97
XRN1-210ENST00000472697 ADGRB3O60242 1522 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SPAG9O60271 1321 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 PRAMEF33A0A0G2JMD5 474 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PRR5-ARHGAP8B1AHC4 643 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 EIF3CLB5ME19 914 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 NRP1O14786 923 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ATP2A1O14983 1001 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PRAMEF10O60809 474 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PPFIA2O75334 1257 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 RAD17O75943 681 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CNTN5O94779 1100 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 HNRNPCP07910 306 aaKnown RBP eCLIP2.73□□□□□ -1.97
XRN1-210ENST00000472697 CHRM4P08173 479 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ELFN1P0C7U0 828 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ENGP17813 658 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GNAT2P19087 354 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TNFRSF1AP19438 455 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SAT1P21673 171 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 EPHA3P29320 983 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TAGLN2P37802 199 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 CSE1LP55060 971 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 FPGSQ05932 587 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 LMAN2Q12907 356 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 KARSQ15046 597 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 ZSCAN23Q3MJ62 389 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GAGE13Q4V321 117 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TCP11X2Q5H9J9 407 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TTC39AQ5SRH9 613 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SERTAD4-AS1Q5TG53 156 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TXNDC8Q6A555 127 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PET117Q6UWS5 81 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 RABEPKQ7Z6M1 372 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SERPINA12Q8IW75 414 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 HMGCLL1Q8TB92 370 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SOCS4Q8WXH5 440 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PIGKQ92643 395 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 FAR2Q96K12 515 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ATP6V0BQ99437 205 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ADAM2Q99965 735 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 OSBPL8Q9BZF1 889 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 KLC2Q9H0B6 622 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TMEM168Q9H0V1 697 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GLOD4Q9HC38 313 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 FANCFQ9NPI8 374 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 IARS2Q9NSE4 1012 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 HCN3Q9P1Z3 774 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 LSM4Q9Y4Z0 139 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 NUP188Q5SRE5 1749 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 AOX1Q06278 1338 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ARHGEF5Q12774 1597 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TMEM94Q12767 1356 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 DHX29Q7Z478 1369 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 NALCNQ8IZF0 1738 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 FEZF1A0PJY2 475 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GOLGA6L6A8MZA4 724 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 AKAP3O75969 853 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TJP3O95049 919 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ACSL3O95573 720 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PLATP00750 562 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GBAP04062 536 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CHRM2P08172 466 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PKMP14618 531 aaKnown RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 STMN1P16949 149 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PTPN2P17706 415 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PI3P19957 117 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SPINK2P20155 84 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 TACR2P21452 398 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PON1P27169 355 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GABRA5P31644 462 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 IDUAP35475 653 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 COMPP49747 757 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 CCR3P51677 355 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 LIMK1P53667 647 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CASP9P55211 416 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 CXADRP78310 365 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PIGFQ07326 219 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 RESTQ13127 1097 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 GRM7Q14831 915 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 RPE65Q16518 533 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 NTRK2Q16620 822 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SYTL3Q4VX76 610 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 KIRREL2Q6UWL6 708 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 FAM83HQ6ZRV2 1179 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 KCTD9Q7L273 389 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 PRRT2Q7Z6L0 340 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 ZNF761Q86XN6 746 aaPredicted RBP2.73□□□□□ -1.97
XRN1-210ENST00000472697 ANKRD13BQ86YJ7 626 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 DENND6AQ8IWF6 608 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 ZNF366Q8N895 744 aa2.73□□□□□ -1.97
XRN1-210ENST00000472697 SYT2Q8N9I0 419 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms