RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C1QTNF3-AMACRE9PGA6 284 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 PAPSS1O43252 624 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 HCRTO43612 131 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SH3BP5O60239 455 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CBFA2T3O75081 653 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 FBXO21O94952 628 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 MOCS3O95396 460 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SEMA4FO95754 770 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NR3C1P04150 777 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CENPBP07199 599 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 HSP90AA1P07900 732 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 SETSIPP0DME0 302 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 RARGP13631 454 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ABCB4P21439 1286 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SYT1P21579 422 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CD27P26842 260 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CORO1AP31146 461 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 ADCY8P40145 1251 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 IL12RB1P42701 662 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ME1P48163 572 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SLC11A2P49281 568 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 TPMTP51580 245 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 KIF11P52732 1056 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NDST1P52848 882 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 RRADP55042 308 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 MAP3K7CLP57077 242 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CEBPZQ03701 1054 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 CCDC15Q0P6D6 951 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CETN1Q12798 172 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 OVGP1Q12889 678 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CUL4AQ13619 759 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NFYCQ13952 458 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SMAD1Q15797 465 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 NFIL3Q16649 462 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ARHGAP44Q17R89 818 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CCDC142Q17RM4 750 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 HLA-BQ31612 363 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 FUT11Q495W5 492 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SPDYAQ5MJ70 313 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 RNF219Q5W0B1 726 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 ZNF776Q68DI1 518 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 KRT39Q6A163 491 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SCARA5Q6ZMJ2 495 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 TPGS1Q6ZTW0 290 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CLEC20AQ6ZU45 233 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 USP49Q70CQ1 688 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 DSG4Q86SJ6 1040 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ACOT1Q86TX2 421 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NOP9Q86U38 636 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 KIF18BQ86Y91 864 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 TMEM25Q86YD3 366 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SLC41A1Q8IVJ1 513 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 UNC45BQ8IWX7 931 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SIX6OS1Q8N1H7 587 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CHCHD4Q8N4Q1 142 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 PDILTQ8N807 584 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 LINC00301Q8NCQ3 95 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SCAMP5Q8TAC9 235 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 PARD3BQ8TEW8 1205 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 DDI1Q8WTU0 396 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 RNF139Q8WU17 664 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CHTF18Q8WVB6 975 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 DHX58Q96C10 678 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CYFIP2Q96F07 1278 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 KCNK16Q96T55 309 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 GPR174Q9BXC1 333 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 DUSP16Q9BY84 665 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 BARX1Q9HBU1 254 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 ITM2CQ9NQX7 267 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 GDF3Q9NR23 364 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 POLR3BQ9NW08 1133 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 TMEM51Q9NW97 253 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ELOVL2Q9NXB9 296 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NCKIPSDQ9NZQ3 722 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 HESX1Q9UBX0 185 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 SUN2Q9UH99 717 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CHORDC1Q9UHD1 332 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 RASAL2Q9UJF2 1139 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 FBXO10Q9UK96 956 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CDC42EP3Q9UKI2 254 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 FZD4Q9ULV1 537 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 HBS1LQ9Y450 684 aaKnown RBP3.63□□□□□ -1.83
XRN1-209ENST00000472625 SPO11Q9Y5K1 396 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 ATP6V1DQ9Y5K8 247 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 CLIC4Q9Y696 253 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 MYH11P35749 1972 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 NBEAQ8NFP9 2946 aa3.63□□□□□ -1.83
XRN1-209ENST00000472625 HELZP42694 1942 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 PLXND1Q9Y4D7 1925 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 TRIP11Q15643 1979 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 RALGAPA1Q6GYQ0 2036 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 A0A0A6YYK5 440 aaPredicted RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 LRRIQ3A6PVS8 624 aaPredicted RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 PRRT4C9JH25 899 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CLDN5O00501 218 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 VILLO15195 856 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 CLIC2O15247 247 aa3.62□□□□□ -1.83
XRN1-209ENST00000472625 POLR2DO15514 142 aaKnown RBP3.62□□□□□ -1.83
XRN1-209ENST00000472625 SLC7A4O43246 635 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms