RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 CPNE8Q86YQ8 564 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 FAM181AQ8N9Y4 354 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 IFI44Q8TCB0 444 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 FGF11Q92914 225 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 ECHDC3Q96DC8 303 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 ZNF599Q96NL3 588 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 FCRL3Q96P31 734 aaPredicted RBP15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 IL12RB2Q99665 862 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 OR1A2Q9Y585 309 aa15.81■□□□□ 0.12
CCDC88B-205ENST00000472524 UNC13CQ8NB66 2214 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 KALRNO60229 2985 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 CPED1A4D0V7 1026 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 A8MX80 341 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 TOR1BO14657 336 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 OPA1O60313 960 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 MAFKO60675 156 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 GCATO75600 419 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 ZIC2O95409 532 aaPredicted RBP15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 CD48P09326 243 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 ELFN1P0C7U0 828 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 ADKP55263 362 aaKnown RBP15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 CCDC173Q0VFZ6 552 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 INPP5AQ14642 412 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 HADHQ16836 314 aaKnown RBP15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 TBC1D25Q3MII6 688 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 GUSBP11Q6P575 273 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 ENPP7Q6UWV6 458 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 HID1Q8IV36 788 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 BBS5Q8N3I7 341 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 PDCD6IPQ8WUM4 868 aaKnown RBP15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 NSMCE1Q8WV22 266 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 SLC39A7Q92504 469 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 TSACCQ96A04 125 aaPredicted RBP15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 APOOQ9BUR5 198 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 USP29Q9HBJ7 922 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 CTTNBP2NLQ9P2B4 639 aa15.8■□□□□ 0.12
CCDC88B-205ENST00000472524 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 TRAFD1O14545 582 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 ATXN7O15265 892 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 CBFA2T2O43439 604 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 RECQL5O94762 991 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PEX11BO96011 259 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 ANXA6P08133 673 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 CELA2BP08218 269 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 TSHRP16473 764 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 HTR1BP28222 390 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 ACTN2P35609 894 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 HSPA9P38646 679 aaKnown RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PEX5P50542 639 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 MAXP61244 160 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 POLR2LP62875 67 aaKnown RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 TLE3Q04726 772 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 NFATC4Q14934 902 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 NR0B2Q15466 257 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 SKOR2Q2VWA4 1001 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 CDCP2Q5VXM1 449 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 LIPIQ6XZB0 460 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 NYAP1Q6ZVC0 841 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 DPPA4Q7L190 304 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 EFL1Q7Z2Z2 1120 aaKnown RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 RD3Q7Z3Z2 195 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 SPACA3Q8IXA5 215 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PGBD5Q8N414 524 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PLA2G15Q8NCC3 412 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 MAPK15Q8TD08 544 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 CTNNBL1Q8WYA6 563 aaPredicted RBP15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 NUDCD1Q96RS6 583 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PACSIN1Q9BY11 444 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 CLPBQ9H078 707 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 ABCG4Q9H172 646 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 DEF6Q9H4E7 631 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 SALL4Q9UJQ4 1053 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 NENFQ9UMX5 172 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 DOLKQ9UPQ8 538 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 PCDHGC4Q9Y5F7 938 aa15.79■□□□□ 0.12
CCDC88B-205ENST00000472524 ZFC3H1O60293 1989 aaKnown RBP15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 TMEM110-MUSTN1A8MSY1 372 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 LMO7DNF2Z398 122 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 TPP1O14773 563 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 MFSD11O43934 449 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 RASGRP1O95267 797 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 CPP00450 1065 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 MPOP05164 745 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 GP1BAP07359 652 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 CTSEP14091 401 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 MMP13P45452 471 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 BLKP51451 505 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 C19orf57Q0VDD7 668 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 MTM1Q13496 603 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 DPYSL3Q14195 570 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 ACOX1Q15067 660 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 AGERQ15109 404 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 ALG11Q2TAA5 492 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 ATP13A4Q4VNC1 1196 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 C6orf132Q5T0Z8 1188 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 CRTC1Q6UUV9 634 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 GLMNQ92990 594 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 NAF1Q96HR8 494 aaKnown RBP15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 TBATAQ96M53 351 aa15.78■□□□□ 0.12
CCDC88B-205ENST00000472524 WDR92Q96MX6 357 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms