RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 VPS9D1Q9Y2B5 631 aa10.68□□□□□ -0.7
APLF-204ENST00000471727 SHROOM3Q8TF72 1996 aa10.68□□□□□ -0.7
APLF-204ENST00000471727 THSD7BQ9C0I4 1608 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 A6NHS1 94 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 A8MT66 165 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PEX1O43933 1283 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SMNDC1O75940 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
APLF-204ENST00000471727 BAG2O95816 211 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 GALTP07902 379 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 F7P08709 466 aaPredicted RBP10.67□□□□□ -0.7
APLF-204ENST00000471727 ATP4BP51164 291 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 EPHB1P54762 984 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PRMT2P55345 433 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 DSG1Q02413 1049 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 GNA12Q03113 381 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 ZNF460Q14592 562 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 RBM20Q5T481 1227 aaKnown RBP10.67□□□□□ -0.7
APLF-204ENST00000471727 LHX8Q68G74 356 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 RNF19BQ6ZMZ0 732 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 BNC2Q6ZN30 1099 aaPredicted RBP10.67□□□□□ -0.7
APLF-204ENST00000471727 CHSY3Q70JA7 882 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 CHST9Q7L1S5 443 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 DHDDSQ86SQ9 333 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SNX32Q86XE0 403 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 TMEM126BQ8IUX1 230 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 LGI2Q8N0V4 545 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PGBD5Q8N414 524 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SLAIN1Q8ND83 568 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 DBF4BQ8NFT6 615 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 RHEBL1Q8TAI7 183 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PPP2R3CQ969Q6 453 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PSKH2Q96QS6 385 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 TTC1Q99614 292 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 OLFM1Q99784 485 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 MGME1Q9BQP7 344 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 MEAF6Q9HAF1 191 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 PDFQ9HBH1 243 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SYTL2Q9HCH5 934 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SPATS2LQ9NUQ6 558 aaKnown RBP10.67□□□□□ -0.7
APLF-204ENST00000471727 ZDHHC7Q9NXF8 308 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 BACE2Q9Y5Z0 518 aa10.67□□□□□ -0.7
APLF-204ENST00000471727 ILVBLA1L0T0 632 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 MAGEA13PA6NCF6 341 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SDHDO14521 159 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 NEMP1O14524 444 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 CD3EAPO15446 510 aaKnown RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 KDELR3O43731 214 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 KIF1CO43896 1103 aaKnown RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 HMBSP08397 361 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 FDXRP22570 491 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 PPP3CCP48454 512 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 DUSP4Q13115 394 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 ART3Q13508 389 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 CCNIQ14094 377 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SQLEQ14534 574 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 NADSYN1Q6IA69 706 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SLC8B1Q6J4K2 584 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 KBTBD6Q86V97 674 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 DSELQ8IZU8 1212 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 PLCD3Q8N3E9 789 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 TTC9BQ8N6N2 239 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 OR4L1Q8NH43 312 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 AGR3Q8TD06 166 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SLC26A7Q8TE54 656 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 DLG3Q92796 817 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 OSBPL1AQ9BXW6 950 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 TFB2MQ9H5Q4 396 aaKnown RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 CYP4F11Q9HBI6 524 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 CATSPERZQ9NTU4 200 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 GTSE1Q9NYZ3 720 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 C6orf203Q9P0P8 240 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 UBA2Q9UBT2 640 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 SCOCQ9UIL1 159 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 TMCO1Q9UM00 188 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 WASF2Q9Y6W5 498 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 AIM2O14862 343 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 CASQ2O14958 399 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 NBNO60934 754 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 GPC4O75487 556 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 VNN2O95498 520 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 GOT2P00505 430 aaKnown RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 FGF4P08620 206 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 CD9P21926 228 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SP100P23497 879 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 ACVRL1P37023 503 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 ABL2P42684 1182 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 NUDT2P50583 147 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 OXCT1P55809 520 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 ATP6V0D1P61421 351 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 SULT2A1Q06520 285 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 TAF1AQ15573 450 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 PDCD2Q16342 344 aaPredicted RBP10.66□□□□□ -0.7
APLF-204ENST00000471727 TYSND1Q2T9J0 566 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 USP41Q3LFD5 358 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 RTP2Q5QGT7 225 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 HECTD3Q5T447 861 aa10.66□□□□□ -0.7
APLF-204ENST00000471727 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms