RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 DDX4Q9NQI0 724 aaKnown RBP1.46□□□□□ -2.18
UBXN4-207ENST00000471246 ITM2CQ9NQX7 267 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SNTG1Q9NSN8 517 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SMARCAL1Q9NZC9 954 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 C1RLQ9NZP8 487 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PEMTQ9UBM1 199 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 VDAC3Q9Y277 283 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 CARD8Q9Y2G2 431 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PCDHGB5Q9Y5G0 923 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 SNX9Q9Y5X1 595 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 PSAT1Q9Y617 370 aa1.46□□□□□ -2.18
UBXN4-207ENST00000471246 A0A0G2JPF8 293 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 PRR23AA6NEV1 266 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPCL3B7ZW38 293 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 MID1O15344 667 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 BCAT2O15382 392 aaPredicted RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 PLRG1O43660 514 aaKnown RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPCL1O60812 293 aaKnown RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SOCS5O75159 536 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TIPRLO75663 272 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 RFPL2O75678 378 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SP1P08047 785 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPCL4P0DMR1 293 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 CD58P19256 250 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 GPTP24298 496 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 POU1F1P28069 291 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HNRNPH1P31943 449 aaKnown RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 GPD2P43304 727 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 NR1H2P55055 460 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ARL4CP56559 192 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 EFNB1P98172 346 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 CHRNDQ07001 517 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF155Q12901 538 aaPredicted RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 GRIK3Q13003 919 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TDGQ13569 410 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 EFR3AQ14156 821 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 RBBP5Q15291 538 aaKnown RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ATG16L1Q676U5 607 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 FAM122CQ6P4D5 195 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 WDR73Q6P4I2 378 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 B3GNT6Q6ZMB0 384 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 FOXL2NBQ6ZUU3 175 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 BBS12Q6ZW61 710 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ADGRG6Q86SQ4 1221 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 GPAT4Q86UL3 456 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SFR1Q86XK3 245 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 PLD5Q8N7P1 536 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 MAB21L3Q8N8X9 362 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SPATA5Q8NB90 893 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SCCPDHQ8NBX0 429 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 LNX1Q8TBB1 728 aaPredicted RBP1.45□□□□□ -2.18
UBXN4-207ENST00000471246 RUFY2Q8WXA3 655 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 FIG4Q92562 907 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TANKQ92844 425 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 CD101Q93033 1021 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TBC1D20Q96BZ9 403 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 FBXL8Q96CD0 374 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ELP4Q96EB1 424 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 RPS6KC1Q96S38 1066 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SIN3AQ96ST3 1273 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 EPYCQ99645 322 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ARPC5LQ9BPX5 153 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HAUS8Q9BT25 410 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ISCA1Q9BUE6 129 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 MMP28Q9H239 520 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TAOK3Q9H2K8 898 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 C17orf75Q9HAS0 396 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 LRRC4Q9HBW1 653 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 CNGB3Q9NQW8 809 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 SMYD2Q9NRG4 433 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 IL1RAPL1Q9NZN1 696 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 KIAA1456Q9P272 454 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 TINAGQ9UJW2 476 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 KCNS2Q9ULS6 477 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 HSF4Q9ULV5 492 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 ADAM18Q9Y3Q7 739 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 COMMD10Q9Y6G5 202 aa1.45□□□□□ -2.18
UBXN4-207ENST00000471246 FAM172BPA6NC97 362 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF587BE7ETH6 402 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SLC22A3O75751 556 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MTA2O94776 668 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CYC1P08574 325 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 HMGB1P09429 215 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SRCP12931 536 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ETFAP13804 333 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 KCNA5P22460 613 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MCM3P25205 808 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 MARK3P27448 753 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 STX2P32856 288 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 EIF2S3P41091 472 aaKnown RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 GLIPR1P48060 266 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CCR5P51681 352 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 CLCN3P51790 818 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 FUT6P51993 359 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ZNF132P52740 706 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 RELQ04864 619 aaPredicted RBP1.44□□□□□ -2.18
UBXN4-207ENST00000471246 UBE3AQ05086 875 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 SLC20A2Q08357 652 aa1.44□□□□□ -2.18
UBXN4-207ENST00000471246 ITGADQ13349 1161 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms