RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 NFATC1O95644 943 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 APBB3O95704 486 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 ASLP04424 464 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 PROS1P07225 676 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 MMP2P08253 660 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SNRPAP09012 282 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 MGAT1P26572 445 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SSTR1P30872 391 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 MPLP40238 635 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SERPINH1P50454 418 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CSE1LP55060 971 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 MAGOHP61326 146 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 GAD2Q05329 585 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CDK18Q07002 472 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 NIPAL4Q0D2K0 466 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 EIF4HQ15056 248 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SLC1A5Q15758 541 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 LONRF1Q17RB8 773 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 PLEKHG6Q3KR16 790 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 ANKRD20A4Q4UJ75 823 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 USP39Q53GS9 565 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 PLA2G2CQ5R387 149 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 N4BP2L1Q5TBK1 243 aaPredicted RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CASC4Q6P4E1 433 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 PKN3Q6P5Z2 889 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 TIFABQ6ZNK6 161 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SYT13Q7L8C5 426 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 TRABD2AQ86V40 505 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 IGDCC3Q8IVU1 814 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CNTN4Q8IWV2 1026 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 AGGF1Q8N302 714 aaeCLIP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CARNMT1Q8N4J0 409 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CPA6Q8N4T0 437 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CCDC33Q8N5R6 958 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 IPMKQ8NFU5 416 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 OR7D4Q8NG98 312 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 OR52K1Q8NGK4 314 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CALML6Q8TD86 181 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 EPS8L3Q8TE67 593 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 OSCP1Q8WVF1 389 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 ATP2A3Q93084 1043 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SGSM3Q96HU1 749 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 TUBGCP5Q96RT8 1024 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CPNE1Q99829 537 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 FAM83CQ9BQN1 747 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SPON2Q9BUD6 331 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CEP41Q9BYV8 373 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 TRABDQ9H4I3 376 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CCDC134Q9H6E4 229 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 VPS51Q9UID3 782 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 FBXO10Q9UK96 956 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 NOVA2Q9UNW9 492 aaKnown RBP9.22□□□□□ -0.93
PTPRE-207ENST00000471218 SLC27A6Q9Y2P4 619 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 TCAF1Q9Y4C2 921 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 RPS6KL1Q9Y6S9 549 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 CHD6Q8TD26 2715 aa9.22□□□□□ -0.93
PTPRE-207ENST00000471218 DENND4CQ5VZ89 1909 aa9.21□□□□□ -0.93
PTPRE-207ENST00000471218 ZCWPW2A0A1B0GU75 182 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TLDC2A0PJX2 215 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 MROH6A6NGR9 719 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 CBX4O00257 560 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TM9SF1O15321 606 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TIMM44O43615 452 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 GDF9O60383 454 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 AVILO75366 819 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TMCC1O94876 653 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 KCNK5O95279 499 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 PRAMEF12O95522 483 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 GSRP00390 522 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 NFKBIAP25963 317 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 GCAP28676 217 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 GP5P40197 560 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 EIF2DP41214 584 aaKnown RBP9.21□□□□□ -0.94
PTPRE-207ENST00000471218 CD86P42081 329 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 GRIA1P42261 906 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SOX9P48436 509 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SGSHP51688 502 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SESN2P58004 480 aaPredicted RBP9.21□□□□□ -0.94
PTPRE-207ENST00000471218 ARF5P84085 180 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 ACVR1Q04771 509 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 DBN1Q16643 649 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 KBTBD12Q3ZCT8 623 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 STXBP5Q5T5C0 1151 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TXNDC11Q6PKC3 985 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 Q6ZS52 159 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 AHI1Q8N157 1196 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 PCDH20Q8N6Y1 951 aaKnown RBP9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SPATA22Q8NHS9 363 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 DCAKDQ8WVC6 231 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 WBP2Q969T9 261 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 ISL2Q96A47 359 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 IFT43Q96FT9 208 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 CERS2Q96G23 380 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 CFAP36Q96G28 342 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 TRIB3Q96RU7 358 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SMC6Q96SB8 1091 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 SEMA3CQ99985 751 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 P2RY13Q9BPV8 354 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 FAM167BQ9BTA0 163 aa9.21□□□□□ -0.94
PTPRE-207ENST00000471218 FICDQ9BVA6 458 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms