RNA–Protein interactions for RNA: ENST00000470903.5

NVL-213, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-213	ENST00000470903	ITPA	Q9BY32	194 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	RBM38	Q9H0Z9	239 aa	Known RBP	4.26	□□□□□ -1.73
NVL-213	ENST00000470903	EBF3	Q9H4W6	596 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	SCPEP1	Q9HB40	452 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	MAGEE1	Q9HCI5	957 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	CYSLTR2	Q9NS75	346 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	SLC6A13	Q9NSD5	602 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	EHD2	Q9NZN4	543 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	ABI3	Q9P2A4	366 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	SLCO3A1	Q9UIG8	710 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	MKLN1	Q9UL63	735 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	KCNE2	Q9Y6J6	123 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	SQOR	Q9Y6N5	450 aa		4.26	□□□□□ -1.73
NVL-213	ENST00000470903	KDM4E	B2RXH2	506 aa	Predicted RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	TNFRSF13B	O14836	293 aa	Predicted RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	WNT9B	O14905	357 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	RGS14	O43566	566 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	RNASEH2A	O75792	299 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	RGS11	O94810	467 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	NAGA	P17050	411 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	GPT	P24298	496 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	SHMT1	P34896	483 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	KCNJ4	P48050	445 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	PIP4K2A	P48426	406 aa	Predicted RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	TTC3	P53804	2025 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	CLNS1A	P54105	237 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	CSTF3	Q12996	717 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	TRAF1	Q13077	416 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	DAB2IP	Q5VWQ8	1189 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	LCTL	Q6UWM7	567 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	NOXA1	Q86UR1	476 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	SCCPDH	Q8NBX0	429 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	TMEM116	Q8NCL8	245 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	BEST2	Q8NFU1	509 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	CREB3L4	Q8TEY5	395 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	ARHGEF2	Q92974	986 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	SLITRK1	Q96PX8	696 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	CLK4	Q9HAZ1	481 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	FBRSL1	Q9HCM7	1045 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	TMEM51	Q9NW97	253 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	PLK2	Q9NYY3	685 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	WWOX	Q9NZC7	414 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	DLGAP2	Q9P1A6	1054 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	FZD10	Q9ULW2	581 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	SLC45A1	Q9Y2W3	748 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	NFE2L3	Q9Y4A8	694 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903	LSM4	Q9Y4Z0	139 aa	Known RBP	4.25	□□□□□ -1.73
NVL-213	ENST00000470903	LRP12	Q9Y561	859 aa		4.25	□□□□□ -1.73
NVL-213	ENST00000470903		A0A1W2PQF6	199 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	FAM90A10P	A6NDY2	464 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	LIPT2	A6NK58	231 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	BECN2	A8MW95	431 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	IFNL4	K9M1U5	179 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	ASAP2	O43150	1006 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	ITM2A	O43736	263 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	IPO7	O95373	1038 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	CRYAB	P02511	175 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	EIF2S1	P05198	315 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	SCP2	P22307	547 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	NFKBIA	P25963	317 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	HOXD3	P31249	432 aa	Predicted RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	PBX3	P40426	434 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	RFX5	P48382	616 aa	Predicted RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	NUDT6	P53370	316 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	GPS2	Q13227	327 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	MYBPC2	Q14324	1141 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	HNF4G	Q14541	408 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	DRAP1	Q14919	205 aa	Predicted RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	KRT24	Q2M2I5	525 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	USP41	Q3LFD5	358 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	SGO1	Q5FBB7	561 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	FSCB	Q5H9T9	825 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	C6orf141	Q5SZD1	244 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	LCE1E	Q5T753	118 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	TSSK4	Q6SA08	328 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	KLHL24	Q6TFL4	600 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	SLC35F3	Q8IY50	421 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	FRMD1	Q8N878	549 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	TRIB2	Q92519	343 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	TIGD1	Q96MW7	591 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	FAM110A	Q9BQ89	295 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	MMTAG2	Q9BU76	263 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	SF3B5	Q9BWJ5	86 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	DCLK3	Q9C098	648 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	PLEKHA5	Q9HAU0	1116 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	DDX4	Q9NQI0	724 aa	Known RBP	4.24	□□□□□ -1.73
NVL-213	ENST00000470903	HCFC1R1	Q9NWW0	138 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	ADAM18	Q9Y3Q7	739 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	LYVE1	Q9Y5Y7	322 aa		4.24	□□□□□ -1.73
NVL-213	ENST00000470903	IGKV2D-30	A0A075B6S6	120 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	IGHV4-28	A0A0C4DH34	117 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	ANKRD18B	A2A2Z9	1011 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	OR6C75	A6NL08	312 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	PTP4A3	O75365	173 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	OAZ2	O95190	189 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	MLYCD	O95822	493 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	MLH1	P40692	756 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	RAD23B	P54727	409 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	NIPAL4	Q0D2K0	466 aa		4.23	□□□□□ -1.73
NVL-213	ENST00000470903	CTTN	Q14247	550 aa	Known RBP	4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms