RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 SHROOM1Q2M3G4 852 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CNPY1Q3B7I2 92 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 LSM12Q3MHD2 195 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 NOL9Q5SY16 702 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 INTS11Q5TA45 600 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 LBX2Q6XYB7 198 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 TFAP2DQ7Z6R9 452 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 AMIGO2Q86SJ2 522 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 KBTBD8Q8NFY9 601 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 MCOLN3Q8TDD5 553 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 LPGAT1Q92604 370 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 MARK4Q96L34 752 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 NPAS2Q99743 824 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 PDZD7Q9H5P4 517 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CD320Q9NPF0 282 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 AHSPQ9NZD4 102 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 RBM47A0AV96 593 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 RGS5O15539 181 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 TULP3O75386 442 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 OR56A5P0C7T3 313 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 IRF1P10914 325 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 MZF1P28698 734 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 SLC25A11Q02978 314 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 MBTD1Q05BQ5 628 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CTBP1Q13363 440 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CERCAMQ5T4B2 595 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 HS6ST3Q8IZP7 471 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 ZNF567Q8N184 647 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 EZH1Q92800 747 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 SKA1Q96BD8 255 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 C19orf60Q96EN9 201 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 OMDQ99983 421 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 EBF3Q9H4W6 596 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 SNX6Q9UNH7 406 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 DUSP12Q9UNI6 340 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 GIT1Q9Y2X7 761 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 FAM220BPB1ANY3 271 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CBX4O00257 560 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 EPN2O95208 641 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CHI3L1P36222 383 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 HALP42357 657 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 HIRAP54198 1017 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 ITGA1P56199 1179 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 ITGADQ13349 1161 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 TSNQ15631 228 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 SPATS1Q496A3 300 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 ARMC4Q5T2S8 1044 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 TMEM63BQ5T3F8 832 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 PMF1Q6P1K2 205 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 METTL3Q86U44 580 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 AMIGO3Q86WK7 504 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 DEPDC4Q8N2C3 294 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 MYDGFQ969H8 173 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 NTAN1Q96AB6 310 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 GLT1D1Q96MS3 346 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 C12orf65Q9H3J6 166 aaKnown RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CRNNQ9UBG3 495 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 NKX1-2Q9UD57 310 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 GNPTGQ9UJJ9 305 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 FZD10Q9ULW2 581 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 CNTN6Q9UQ52 1028 aa10.57□□□□□ -0.72
RRP1B-202ENST00000470886 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
RRP1B-202ENST00000470886 AQP12BA6NM10 295 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CPSF4O95639 269 aaKnown RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 HNRNPLP14866 589 aaKnown RBP eCLIP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ETS2P15036 469 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ZNF12P17014 697 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 PPIBP23284 216 aaKnown RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 VGLL4Q14135 290 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CCDC85BQ15834 202 aaPredicted RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ZNF605Q86T29 641 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CPNE8Q86YQ8 564 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 AQP12AQ8IXF9 295 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CPSF7Q8N684 471 aaKnown RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ZNF781Q8N8C0 355 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 RIBC2Q9H4K1 309 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CAB39LQ9H9S4 337 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 SMPD3Q9NY59 655 aaPredicted RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 RABL2BQ9UNT1 228 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 TCAF1Q9Y4C2 921 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 TBKBP1A7MCY6 615 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ANXA5P08758 320 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 HPCAL1P37235 193 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 HCAR3P49019 387 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 AQP4P55087 323 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 HPCAP84074 193 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 GRM3Q14832 879 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ZNF284Q2VY69 593 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 NUSAP1Q9BXS6 441 aaKnown RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 SLC25A13Q9UJS0 675 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 TRIM17Q9Y577 477 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 KPNA5O15131 536 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 SLC7A1P30825 629 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 ADCYAP1R1P41586 468 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 PABPC1LQ4VXU2 614 aaKnown RBP10.56□□□□□ -0.72
RRP1B-202ENST00000470886 SLC9A4Q6AI14 798 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 GK5Q6ZS86 529 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 CYS1Q717R9 158 aa10.56□□□□□ -0.72
RRP1B-202ENST00000470886 DNAJB14Q8TBM8 379 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms