RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 ZNF641Q96N77 438 aaPredicted RBP11.04□□□□□ -0.64
SND1-208ENST00000470463 FAM111AQ96PZ2 611 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 UHRF1Q96T88 793 aaPredicted RBP11.04□□□□□ -0.64
SND1-208ENST00000470463 AGAP2Q99490 1192 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 KLF6Q99612 283 aaPredicted RBP11.04□□□□□ -0.64
SND1-208ENST00000470463 TTC1Q99614 292 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 CPEB1Q9BZB8 566 aaKnown RBP11.04□□□□□ -0.64
SND1-208ENST00000470463 SLC13A1Q9BZW2 595 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 NKX2-4Q9H2Z4 354 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 INTS10Q9NVR2 710 aaKnown RBP11.04□□□□□ -0.64
SND1-208ENST00000470463 CCL26Q9Y258 94 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 CHKBQ9Y259 395 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 PKP3Q9Y446 797 aa11.04□□□□□ -0.64
SND1-208ENST00000470463 ERICH4A6NGS2 130 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 GOLGA8CPA6NN73 597 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 H7C0S8 307 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 HOXC11O43248 304 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 HTRA2O43464 458 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 FZD6O60353 706 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SNX3O60493 162 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 KIAA0754O94854 1291 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SNUPNO95149 360 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 PGLSO95336 258 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 POP4O95707 220 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 PRLP01236 227 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 AHSGP02765 367 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 ATP5BP06576 529 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 SRPRAP08240 638 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 TROVE2P10155 538 aaKnown RBP eCLIP11.03□□□□□ -0.64
SND1-208ENST00000470463 TYRP14679 529 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 CEBPBP17676 345 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 POLR2EP19388 210 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 ARNTP27540 789 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 HLA-FP30511 346 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 CD70P32970 193 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SLC1A2P43004 574 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 RECQLP46063 649 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 RGRP47804 291 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SERPINB4P48594 390 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 POLR2LP62875 67 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 ECT2LQ008S8 904 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 PDE1CQ14123 709 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 GALNT3Q14435 633 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 USP10Q14694 798 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 PDGFRLQ15198 375 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 ZDHHC20Q5W0Z9 365 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 LINGO4Q6UY18 593 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 KIAA0907Q7Z7F0 614 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 TMEM25Q86YD3 366 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 CILP2Q8IUL8 1156 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 NUDCD3Q8IVD9 361 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 OTUD6BQ8N6M0 293 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 PAF1Q8N7H5 531 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 LPCAT1Q8NF37 534 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 OR13J1Q8NGT2 312 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 OR4L1Q8NH43 312 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 WFDC5Q8TCV5 224 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 BPIFB1Q8TDL5 484 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SMARCD2Q92925 531 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 HDAC10Q969S8 669 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 MYO19Q96H55 970 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SEC16BQ96JE7 1060 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 FAM96AQ9H5X1 160 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 NSUN3Q9H649 340 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 POPDC3Q9HBV1 291 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 DUS2Q9NX74 493 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 PLK2Q9NYY3 685 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 LMCD1Q9NZU5 365 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SLC17A7Q9P2U7 560 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 SLC27A6Q9Y2P4 619 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 ACOT9Q9Y305 439 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 USP15Q9Y4E8 981 aaPredicted RBP11.03□□□□□ -0.64
SND1-208ENST00000470463 COMMD10Q9Y6G5 202 aa11.03□□□□□ -0.64
SND1-208ENST00000470463 A0A096LPK6 155 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 CCDC189A1A4V9 331 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 STX7O15400 261 aaKnown RBP11.02□□□□□ -0.65
SND1-208ENST00000470463 EDF1O60869 148 aaKnown RBP11.02□□□□□ -0.65
SND1-208ENST00000470463 TGDSO95455 350 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 PRAMEF12O95522 483 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 ADH5P11766 374 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 IGFBP4P22692 258 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 GRK2P25098 689 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 PMLP29590 882 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 TTPAP49638 278 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 ZNF140P52738 457 aaPredicted RBP11.02□□□□□ -0.65
SND1-208ENST00000470463 RAB10P61026 200 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 IHHQ14623 411 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 FASTKD1Q53R41 847 aaKnown RBP11.02□□□□□ -0.65
SND1-208ENST00000470463 CARD16Q5EG05 197 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 LY6G5CQ5SRR4 150 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 LYPLAL1Q5VWZ2 237 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 FAM45BPQ6NSW5 357 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 KLC3Q6P597 504 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 C22orf39Q6P5X5 142 aa11.02□□□□□ -0.65
SND1-208ENST00000470463 CERS6Q6ZMG9 384 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms