RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 TTC7AQ9ULT0 858 aaPredicted RBP11.69□□□□□ -0.54
HLA-C-206ENST00000470363 R3HDM2Q9Y2K5 976 aaKnown RBP11.69□□□□□ -0.54
HLA-C-206ENST00000470363 FADS3Q9Y5Q0 445 aa11.69□□□□□ -0.54
HLA-C-206ENST00000470363 HS3ST3A1Q9Y663 406 aa11.69□□□□□ -0.54
HLA-C-206ENST00000470363 U3KQA8 63 aa11.69□□□□□ -0.54
HLA-C-206ENST00000470363 TP53BP1Q12888 1972 aaPredicted RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 POM121BA6NF01 834 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 KRIT1O00522 736 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 RAD51BO15315 384 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 SPINT1O43278 529 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 DAPK3O43293 454 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 TLX3O43711 291 aaPredicted RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 MAP3K6O95382 1288 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 ADRB3P13945 408 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 ARL4AP40617 200 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 CCNHP51946 323 aaPredicted RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 CLDN2P57739 230 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 TPI1P60174 286 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 MRPS25P82663 173 aaKnown RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 SNX1Q13596 522 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 RWDD4Q6NW29 188 aaKnown RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 NPNTQ6UXI9 565 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 DCBLD1Q8N8Z6 715 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 SPATA4Q8NEY3 305 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 GRIN3AQ8TCU5 1115 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 C1orf54Q8WWF1 131 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 ARHGEF2Q92974 986 aaKnown RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 CRELD1Q96HD1 420 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 LENG8Q96PV6 779 aaPredicted RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 ZNF670Q9BS34 389 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 SPON2Q9BUD6 331 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 C1QTNF2Q9BXJ5 285 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 SLC17A9Q9BYT1 436 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 NOL6Q9H6R4 1146 aaKnown RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 ATP13A1Q9HD20 1204 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 TMEM248Q9NWD8 314 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 RNF14Q9UBS8 474 aa11.68□□□□□ -0.54
HLA-C-206ENST00000470363 FCF1Q9Y324 198 aaKnown RBP11.68□□□□□ -0.54
HLA-C-206ENST00000470363 KALRNO60229 2985 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CTAGE15A4D2H0 777 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PIAS2O75928 621 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 TJP3O95049 919 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 SLU7O95391 586 aaKnown RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PAK4O96013 591 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CTAGE8P0CG41 777 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PECAM1P16284 738 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 RHOQP17081 205 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 AKT2P31751 481 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PTPN7P35236 360 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 HNF1BP35680 557 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 EIF2S3P41091 472 aaKnown RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 MAPKAPK2P49137 400 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 NEK3P51956 506 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 RPS21P63220 83 aaKnown RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 KLF1Q13351 362 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 DPYSQ14117 519 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 TFDP2Q14188 446 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 FZD2Q14332 565 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 TPRG1LQ5T0D9 272 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CDCP2Q5VXM1 449 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 Q6ZSR6 202 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 RFX8Q6ZV50 586 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 BBS12Q6ZW61 710 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 B4GALNT4Q76KP1 1039 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CTAGE6Q86UF2 777 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CTAGE4Q8IX94 777 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 KLHL7Q8IXQ5 586 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CEP112Q8N8E3 955 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PRELID2Q8N945 189 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 FAM181AQ8N9Y4 354 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 MNS1Q8NEH6 495 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 FAM174AQ8TBP5 190 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 ASB12Q8WXK4 309 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 ATG4AQ8WYN0 398 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 FAF2Q96CS3 445 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 PPP1R16AQ96I34 528 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 LRIG1Q96JA1 1093 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 FEM1CQ96JP0 617 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 EPAS1Q99814 870 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 MYOCQ99972 504 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 DDX47Q9H0S4 455 aaKnown RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 HECAQ9UBI9 543 aaPredicted RBP11.67□□□□□ -0.54
HLA-C-206ENST00000470363 KLF15Q9UIH9 416 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 MGAQ8IWI9 3026 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 CHD5Q8TDI0 1954 aa11.67□□□□□ -0.54
HLA-C-206ENST00000470363 SPTY2D1-AS1A0A0U1RR47 76 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 APOL1O14791 398 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 AREL1O15033 823 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 SCAMP1O15126 338 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 PCDH8O95206 1070 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 CKMT1AP12532 417 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 ERCC2P18074 760 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 EPHB2P29323 1055 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 GKP32189 559 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 ABL2P42684 1182 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 KCNJ1P48048 391 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 E2F1Q01094 437 aa11.66□□□□□ -0.54
HLA-C-206ENST00000470363 GBE1Q04446 702 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms