RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PARP15Q460N3 678 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CTXN3Q4LDR2 81 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TSTD2Q5T7W7 516 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CES4AQ5XG92 561 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 AFMIDQ63HM1 303 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ZFP1Q6P2D0 407 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 BNC2Q6ZN30 1099 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC24A5Q71RS6 500 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 DEFB107AQ8IZN7 70 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PLD6Q8N2A8 252 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 FBXW8Q8N3Y1 598 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 FSTL5Q8N475 847 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 POU5F2Q8N7G0 328 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CCNYL1Q8N7R7 359 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CNTD1Q8N815 330 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 KYQ8NBH2 561 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 OR6Y1Q8NGX8 325 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SPATA22Q8NHS9 363 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SCAMP5Q8TAC9 235 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PIP4K2CQ8TBX8 421 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SLC26A7Q8TE54 656 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 C2orf15Q8WU43 125 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 KCTD4Q8WVF5 259 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TRIB2Q92519 343 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 AZIN2Q96A70 460 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PABPC5Q96DU9 382 aaKnown RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 IFT43Q96FT9 208 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 GLT1D1Q96MS3 346 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ZNF778Q96MU6 729 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ASB2Q96Q27 587 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PANX3Q96QZ0 392 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 NR1H4Q96RI1 486 aaPredicted RBP8.05□□□□□ -1.12
SMC4-212ENST00000470240 TTC1Q99614 292 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PAAF1Q9BRP4 392 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CYP4F11Q9HBI6 524 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 ARNT2Q9HBZ2 717 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 S100A14Q9HCY8 104 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 NT5MQ9NPB1 228 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 RGS18Q9NS28 235 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TMEM30AQ9NV96 361 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TMLHEQ9NVH6 421 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 TMEM248Q9NWD8 314 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 GTSE1Q9NYZ3 720 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CLIC5Q9NZA1 410 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PDP2Q9P2J9 529 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 XPR1Q9UBH6 696 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 CDH22Q9UJ99 828 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 SSX2IPQ9Y2D8 614 aa8.05□□□□□ -1.12
SMC4-212ENST00000470240 PLXNA3P51805 1871 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 NLRC5Q86WI3 1866 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CCDC78A2IDD5 438 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 GOLGA8TH3BQL2 631 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 I6L893 689 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 TNFRSF10BO14763 440 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 OIP5O43482 229 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 RAMP2O60895 175 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ADAMTS4O75173 837 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SMIM24O75264 130 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SMNDC1O75940 238 aaKnown RBP eCLIP8.04□□□□□ -1.122e-16■■■■■ 67.6
SMC4-212ENST00000470240 OAZ2O95190 189 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 AHSGP02765 367 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 PRKCGP05129 697 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 FGF1P05230 155 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 PDHA1P08559 390 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 HLA-DPA1P20036 260 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 GLDCP23378 1020 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 MPSTP25325 297 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 PIK3R1P27986 724 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ADRA1AP35348 466 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 AVPR1AP37288 418 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ABCG1P45844 678 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 GLRBP48167 497 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 FLT3LGP49771 235 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 NAGLUP54802 743 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SH3BGRP55822 239 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 STX1BP61266 288 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 NAA20P61599 178 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 MPP1Q00013 466 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SLC25A3Q00325 362 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CTBP1Q13363 440 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 EIF4EBP2Q13542 120 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 DLG2Q15700 870 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 HSF5Q4G112 596 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 ARL13AQ5H913 290 aaPredicted RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 SAMD5Q5TGI4 173 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CST9Q5W186 159 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 FAM45BPQ6NSW5 357 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 MRNIPQ6NTE8 343 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ESRP1Q6NXG1 681 aaKnown RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 TMEM154Q6P9G4 183 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 ARHGAP36Q6ZRI8 547 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CTU1Q7Z7A3 348 aaKnown RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 DHDDSQ86SQ9 333 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 LRRTM3Q86VH5 581 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 MFN1Q8IWA4 741 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 SLC25A41Q8N5S1 370 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 CPSF7Q8N684 471 aaKnown RBP8.04□□□□□ -1.12
SMC4-212ENST00000470240 GALNT6Q8NCL4 622 aa8.04□□□□□ -1.12
SMC4-212ENST00000470240 OR6P1Q8NGX9 317 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms