RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 IVDP26440 423 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 OXTRP30559 389 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 EPHB1P54762 984 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 DHX34Q14147 1143 aaKnown RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 KCNJ11Q14654 390 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 SLC1A5Q15758 541 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 DNTTIP2Q5QJE6 756 aaKnown RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 SEL1L3Q68CR1 1132 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 DPPA4Q7L190 304 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 SLC41A1Q8IVJ1 513 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 TMEFF1Q8IYR6 380 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 CPT1BQ92523 772 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 RAB7BQ96AH8 199 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 RMDN1Q96DB5 314 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 SCRN2Q96FV2 425 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 WRAP53Q9BUR4 548 aaKnown RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 FSD1LQ9BXM9 530 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 L2HGDHQ9H9P8 463 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 EBF2Q9HAK2 575 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
COL9A3-209ENST00000469852 PCDHGA2Q9Y5H1 932 aa14.85□□□□□ -0.03
COL9A3-209ENST00000469852 PLXNA2O75051 1894 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 SCN8AQ9UQD0 1980 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 SPAG17Q6Q759 2223 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TRPM6Q9BX84 2022 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3DA0A087WVF3 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3IA0A087WXS9 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3EA0A087X179 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3KA0A087X1G2 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 A0A1W2PQ67 120 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3FA6NER0 549 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 CAPN8A6NHC0 703 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3LB9A6J9 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 MMP20O60882 483 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 RNGTTO60942 597 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TMEM63AO94886 807 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 IGHV4-34P06331 123 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 APRTP07741 180 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3HP0C7X1 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 GM2AP17900 193 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 GRIA4P48058 902 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 RPL26P61254 145 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 POLR2LP62875 67 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 RPL6Q02878 288 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 SFSWAPQ12872 951 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 MSLNQ13421 630 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 FGL2Q14314 439 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 CNGA3Q16281 694 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 CDKN3Q16667 212 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TMEM52BQ4KMG9 183 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3GQ6DHY5 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3CQ6IPX1 549 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 CRTC1Q6UUV9 634 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 C4orf22Q6V702 233 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 ZNF534Q76KX8 674 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 TBC1D3Q8IZP1 549 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 OR2T34Q8NGX1 318 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 KLK6Q92876 244 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 RUNDC3BQ96NL0 473 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 HINFPQ9BQA5 517 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 ADGRE3Q9BY15 652 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 DUSP15Q9H1R2 295 aaPredicted RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 LRRC40Q9H9A6 602 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 ASIC3Q9UHC3 531 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 RPL26L1Q9UNX3 145 aaKnown RBP14.84□□□□□ -0.03
COL9A3-209ENST00000469852 COQ6Q9Y2Z9 468 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 SLCO1B1Q9Y6L6 691 aa14.84□□□□□ -0.03
COL9A3-209ENST00000469852 A0A1W2PQU0 124 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 CTAGE15A4D2H0 777 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 LRRC72A6NJI9 287 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 GOLGA8CPA6NN73 597 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 E7EVH7 732 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 NEMP1O14524 444 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 AURKAO14965 403 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 NDUFS2O75306 463 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 SUN1O94901 812 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 PCDH8O95206 1070 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 EPOP01588 193 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 CTAGE8P0CG41 777 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 HLA-DPA1P20036 260 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 MAT2AP31153 395 aaKnown RBP14.83□□□□□ -0.04
COL9A3-209ENST00000469852 VIPR1P32241 457 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 PTGER3P43115 390 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 LIG3P49916 1009 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 ELP6Q0PNE2 266 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 PLK5Q496M5 336 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 TMEM259Q4ZIN3 620 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 KIAA0895LQ68EN5 471 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 ERAP2Q6P179 960 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 LIPIQ6XZB0 460 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 SYDE1Q6ZW31 735 aaPredicted RBP14.83□□□□□ -0.04
COL9A3-209ENST00000469852 USP45Q70EL2 814 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 ARMCX6Q7L4S7 300 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 CTAGE6Q86UF2 777 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 CTAGE4Q8IX94 777 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 MMGT1Q8N4V1 131 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 OR52K1Q8NGK4 314 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 BIRC7Q96CA5 298 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 EID2BQ96D98 161 aa14.83□□□□□ -0.04
COL9A3-209ENST00000469852 PPP1R2P1Q96PQ5 205 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms