RNA–Protein interactions for RNA: ENST00000469102.1

CMC1-208, Transcript of C-X9-C motif containing 1, human

TSL 1 (best)

Gene CMC1, Length 788 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CMC1-208	ENST00000469102	UBXN10	Q96LJ8	280 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	C3orf30	Q96M34	536 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	GLIS2	Q9BZE0	524 aa	Predicted RBP	4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	GPR63	Q9BZJ6	419 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	SPRY4	Q9C004	299 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	INTS2	Q9H0H0	1204 aa	Known RBP	4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	KCNN2	Q9H2S1	579 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	ESRP2	Q9H6T0	727 aa	Known RBP	4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	GGA3	Q9NZ52	723 aa		4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	CNOT7	Q9UIV1	285 aa	Known RBP	4.55	□□□□□ -1.68
CMC1-208	ENST00000469102	ZNF587B	E7ETH6	402 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	SOCS6	O14544	535 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	CLGN	O14967	610 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	GRID2	O43424	1007 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	UMOD	P07911	640 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	CNTF	P26441	200 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	ECT2L	Q008S8	904 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	ARL16	Q0P5N6	197 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	MMEL1	Q495T6	779 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	SMIM29	Q86T20	159 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	SATL1	Q86VE3	508 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	POC1A	Q8NBT0	407 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	C11orf65	Q8NCR3	313 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	NR4A3	Q92570	626 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	RND1	Q92730	232 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	TANK	Q92844	425 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	INPP4A	Q96PE3	977 aa	Predicted RBP	4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	OR1F2P	Q96R84	312 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	HAUS8	Q9BT25	410 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	UBTD1	Q9HAC8	227 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	SDF2L1	Q9HCN8	221 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	C20orf141	Q9NUB4	165 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	ZNF224	Q9NZL3	707 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	HCN3	Q9P1Z3	774 aa		4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
CMC1-208	ENST00000469102	GAGE10	A6NGK3	116 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	HNRNPCL2	B2RXH8	293 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	MID1	O15344	667 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	PLRG1	O43660	514 aa	Known RBP	4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	GUCY1B2	O75343	617 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	SHMT1	P34896	483 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	ZBTB17	Q13105	803 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	ITGAD	Q13349	1161 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	TXNDC8	Q6A555	127 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	FBXO46	Q6PJ61	603 aa	Predicted RBP	4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	TUBA1A	Q71U36	451 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	SLC35F3	Q8IY50	421 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	AGBL3	Q8NEM8	1001 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	NEK9	Q8TD19	979 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	FBXL8	Q96CD0	374 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	NODAL	Q96S42	347 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	SIN3A	Q96ST3	1273 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	TUBA1C	Q9BQE3	449 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	FUZ	Q9BT04	418 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	EBF2	Q9HAK2	575 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	MAGEE1	Q9HCI5	957 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	C1RL	Q9NZP8	487 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	SIX4	Q9UIU6	781 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	TINAG	Q9UJW2	476 aa		4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	LSM4	Q9Y4Z0	139 aa	Known RBP	4.53	□□□□□ -1.68
CMC1-208	ENST00000469102	ATXN2	Q99700	1313 aa	Known RBP	4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	IGHV4OR15-8	A0A075B7B6	117 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	TAF4	O00268	1085 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	BCAT2	O15382	392 aa	Predicted RBP	4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	MTA2	O94776	668 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	POLB	P06746	335 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	MMP2	P08253	660 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	SRC	P12931	536 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	STX2	P32856	288 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	EIF2S3	P41091	472 aa	Known RBP	4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	UFM1	P61960	85 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	TLE2	Q04725	743 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	NEDD9	Q14511	834 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	VEPH1	Q14D04	833 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	TAF12	Q16514	161 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	C2orf68	Q2NKX9	166 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	ATP13A5	Q4VNC0	1218 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	GFI1B	Q5VTD9	330 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	HIST2H2BC	Q6DN03	193 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	HIST2H2BD	Q6DRA6	164 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	WDR73	Q6P4I2	378 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	UNQ6126/PRO20091	Q6UXV3	157 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	C9orf139	Q6ZV77	190 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	CHERP	Q8IWX8	916 aa	Known RBP	4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	SCCPDH	Q8NBX0	429 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	BBS4	Q96RK4	519 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	PLEKHA4	Q9H4M7	779 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	EVA1A	Q9H8M9	152 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	LRRC4	Q9HBW1	653 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	LUZP4	Q9P127	313 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	STON1	Q9Y6Q2	735 aa		4.52	□□□□□ -1.69
CMC1-208	ENST00000469102	WDR81	Q562E7	1941 aa		4.51	□□□□□ -1.69
CMC1-208	ENST00000469102		A0A0B4J293	547 aa		4.51	□□□□□ -1.69
CMC1-208	ENST00000469102	RFPL2	O75678	378 aa		4.51	□□□□□ -1.69
CMC1-208	ENST00000469102	MT-CYB	P00156	380 aa	Predicted RBP	4.51	□□□□□ -1.69
CMC1-208	ENST00000469102	CYC1	P08574	325 aa		4.51	□□□□□ -1.69
CMC1-208	ENST00000469102	CD58	P19256	250 aa		4.51	□□□□□ -1.69
CMC1-208	ENST00000469102	DGKA	P23743	735 aa		4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms