RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TMEM135Q86UB9 458 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 MMAAQ8IVH4 418 aaKnown RBP17.59■□□□□ 0.41
RPL39-202ENST00000468844 PALM2Q8IXS6 379 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 UBALD2Q8IYN6 164 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 MFSD3Q96ES6 412 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 CFAP36Q96G28 342 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 NAT9Q9BTE0 207 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 KIFC1Q9BW19 673 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 CD248Q9HCU0 757 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 PHTF1Q9UMS5 762 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 MTF2Q9Y483 593 aaPredicted RBP17.59■□□□□ 0.41
RPL39-202ENST00000468844 RPS6KL1Q9Y6S9 549 aa17.59■□□□□ 0.41
RPL39-202ENST00000468844 PLXNA2O75051 1894 aa17.58■□□□□ 0.41
RPL39-202ENST00000468844 A0A0U1RQS6 177 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 FAM237BA0A1B0GVD1 139 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 CCDC78A2IDD5 438 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 LDB2O43679 373 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 HOXB2P14652 356 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 COL9A1P20849 921 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 ADRA1DP25100 572 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 COPAP53621 1224 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 SEPT6Q14141 434 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 CRYMQ14894 314 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 UGP2Q16851 508 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 SDE2Q6IQ49 451 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 Q6ZS52 159 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 C3orf62Q6ZUJ4 267 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 CCNJLQ8IV13 435 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 SIX5Q8N196 739 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 PPHLN1Q8NEY8 458 aaKnown RBP17.58■□□□□ 0.4
RPL39-202ENST00000468844 BRSK1Q8TDC3 778 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 RANBP9Q96S59 729 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 FUT8Q9BYC5 575 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 RSPH9Q9H1X1 276 aaPredicted RBP17.58■□□□□ 0.4
RPL39-202ENST00000468844 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.58■□□□□ 0.47e-28■■■■■ 59.5
RPL39-202ENST00000468844 PPIL1Q9Y3C6 166 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 ARL5AQ9Y689 179 aa17.58■□□□□ 0.4
RPL39-202ENST00000468844 A0A1W2PQ67 120 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 MAGEB16A2A368 324 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 HEATR9A2RTY3 570 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 CAPN8A6NHC0 703 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 C16orf96A6NNT2 1141 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 SYNCRIPO60506 623 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 USP1O94782 785 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 NMBRP28336 390 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 STEAP4Q687X5 459 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 PARS2Q7L3T8 475 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 GLT6D1Q7Z4J2 308 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 CACUL1Q86Y37 369 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 UHMK1Q8TAS1 419 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 PTCD2Q8WV60 388 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 SCRN2Q96FV2 425 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 FCRL3Q96P31 734 aaPredicted RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 NECAB3Q96P71 396 aaPredicted RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 MCCC1Q96RQ3 725 aaPredicted RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 MKRN2Q9H000 416 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 VPS37BQ9H9H4 285 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 MRM3Q9HC36 420 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 LTB4R2Q9NPC1 389 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 DKK3Q9UBP4 350 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 WDFY4Q6ZS81 3184 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 ZCWPW2A0A1B0GU75 182 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 KANSL1LA0AUZ9 987 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 MROH6A6NGR9 719 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 POLBP06746 335 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 ITGB7P26010 798 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 HNF1BP35680 557 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 ABL2P42684 1182 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 POLR2LP62875 67 aaKnown RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 SATB1Q01826 763 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 FZD5Q13467 585 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 STARD3Q14849 445 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 DSG4Q86SJ6 1040 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 HCAR2Q8TDS4 363 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 ARRDC3Q96B67 414 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 ZNF669Q96BR6 464 aaPredicted RBP17.57■□□□□ 0.4
RPL39-202ENST00000468844 SHDQ96IW2 340 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 LYSMD1Q96S90 227 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 FOXQ1Q9C009 403 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 MAGEE1Q9HCI5 957 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 KCTD3Q9Y597 815 aa17.57■□□□□ 0.4
RPL39-202ENST00000468844 TCRBV9S1A1TA0A576 114 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 NPIPB15A6NHN6 443 aaPredicted RBP17.56■□□□□ 0.4
RPL39-202ENST00000468844 SASH3O75995 380 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 PSMD8P48556 350 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 SEMG2Q02383 582 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 UBXN2BQ14CS0 331 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 ANKRD20A4Q4UJ75 823 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 OR13J1Q8NGT2 312 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 GSDMBQ8TAX9 411 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 EID2BQ96D98 161 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 TREX1Q9NSU2 369 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 POLR3BQ9NW08 1133 aaPredicted RBP17.56■□□□□ 0.4
RPL39-202ENST00000468844 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 SLC2A6Q9UGQ3 507 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 MMP17Q9ULZ9 603 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 EML5Q05BV3 1969 aa17.56■□□□□ 0.4
RPL39-202ENST00000468844 C1QTNF3-AMACRE9PGA6 284 aa17.55■□□□□ 0.4
RPL39-202ENST00000468844 BUD23O43709 281 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms