RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SUV39H1O43463 412 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 BUB1BO60566 1050 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 GFPT2O94808 682 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 KRT3P12035 628 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 UNGP13051 313 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 RFC1P35251 1148 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 GSCP56915 257 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 KIAA1024LP59773 190 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 BECN1Q14457 450 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 TBR1Q16650 682 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 PARP15Q460N3 678 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 C14orf28Q4W4Y0 310 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 ERAP2Q6P179 960 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 ATG14Q6ZNE5 492 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 TAF8Q7Z7C8 310 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 SLFN11Q7Z7L1 901 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 FAM46DQ8NEK8 389 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 OR56A4Q8NGH8 313 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 FUBP1Q96AE4 644 aaKnown RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 CMKLR1Q99788 373 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 SEMA3CQ99985 751 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 GANQ9H2C0 597 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 PDFQ9HBH1 243 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 FGF22Q9HCT0 170 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 LRIT1Q9P2V4 623 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 UBA2Q9UBT2 640 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-207ENST00000468385 ATP8A1Q9Y2Q0 1164 aa13.16□□□□□ -0.3
PTPN7-207ENST00000468385 HECTD1Q9ULT8 2610 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 A0A1W2PQC6 194 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 CFAP69A5D8W1 941 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 B4DGG1 531 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 PES1O00541 588 aaKnown RBP13.15□□□□□ -0.3
PTPN7-207ENST00000468385 GPD1P21695 349 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 MAPK10P53779 464 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 CYP4F2P78329 520 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 B4GALNT1Q00973 533 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 RALGDSQ12967 914 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 GRM3Q14832 879 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 BRAT1Q6PJG6 821 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 WDR59Q6PJI9 974 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 CAMK1DQ8IU85 385 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 CCL4L1Q8NHW4 92 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 ZNF641Q96N77 438 aaPredicted RBP13.15□□□□□ -0.3
PTPN7-207ENST00000468385 PCDHB18PQ96TA0 734 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 TMEM168Q9H0V1 697 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 SEMA6CQ9H3T2 930 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 FZD10Q9ULW2 581 aa13.15□□□□□ -0.3
PTPN7-207ENST00000468385 ANKRD36A6QL64 1941 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 J3KR12 359 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CACNB4O00305 520 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CCP110O43303 1012 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 NUDT21O43809 227 aaKnown RBP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CREB3O43889 395 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 RECQL5O94762 991 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 HOXC4P09017 264 aaPredicted RBP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 SFTPCP11686 197 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 GM2AP17900 193 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CD82P27701 267 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 RGRP47804 291 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 KLK7P49862 253 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 JAM2P57087 298 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 SRSF1Q07955 248 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 ARHGEF7Q14155 803 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 C16orf72Q14CZ0 275 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 DPCR1Q3MIW9 517 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 EFHC2Q5JST6 749 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CFAP58Q5T655 872 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 SPECC1LQ69YQ0 1117 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 TRIM72Q6ZMU5 477 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 ZSCAN1Q8NBB4 408 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 C3orf20Q8ND61 904 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 TUBGCP5Q96RT8 1024 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 FUCA2Q9BTY2 467 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 SELENOOQ9BVL4 669 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 LGR4Q9BXB1 951 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 LRRC19Q9H756 370 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 CATSPERBQ9H7T0 1116 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 SAMSN1Q9NSI8 373 aaKnown RBP13.14□□□□□ -0.31
PTPN7-207ENST00000468385 ADAM22Q9P0K1 906 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 PCDHB11Q9Y5F2 797 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 UNC13CQ8NB66 2214 aa13.14□□□□□ -0.31
PTPN7-207ENST00000468385 TCRBV5S1A1TA0A578 114 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 SIGLEC16A6NMB1 481 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-207ENST00000468385 TNFRSF10CO14798 259 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 B4GAT1O43505 415 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 PRAMEF11O60813 436 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 CCL4P13236 92 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 ERCC5P28715 1186 aaPredicted RBP13.13□□□□□ -0.31
PTPN7-207ENST00000468385 SOX5P35711 763 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 TRIM23P36406 574 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 UBE2HP62256 183 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 TCP11X2Q5H9J9 407 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 COLEC12Q5KU26 742 aa13.13□□□□□ -0.31
PTPN7-207ENST00000468385 PHF19Q5T6S3 580 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms