RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DOCK4Q8N1I0 1966 aa10.3□□□□□ -0.76
HDAC3-203ENST00000467533 MED13LQ71F56 2210 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 KELP23276 732 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 RPL34P49207 117 aaKnown RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 KIAA1024LP59773 190 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 SNRPD1P62314 119 aaKnown RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 ELP6Q0PNE2 266 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 ADAM9Q13443 819 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 SEMA5AQ13591 1074 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 ELOAQ14241 798 aaKnown RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 TSR1Q2NL82 804 aaKnown RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 ANKRD40Q6AI12 368 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 JMJD6Q6NYC1 403 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 TMEM71Q6P5X7 295 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 LRRC31Q6UY01 552 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 C17orf82Q86X59 251 aaPredicted RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 LINC00301Q8NCQ3 95 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 OR2AP1Q8NGE2 309 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 PATE1Q8WXA2 126 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 ULBP3Q9BZM4 244 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 FBXO8Q9NRD0 319 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 SPATS2LQ9NUQ6 558 aaKnown RBP10.29□□□□□ -0.76
HDAC3-203ENST00000467533 CSMD2Q7Z408 3487 aa10.29□□□□□ -0.76
HDAC3-203ENST00000467533 PCSK5Q92824 1860 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 A0A1B0GTL3 188 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ILVBLA1L0T0 632 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PRSS38A1L453 326 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PIPSLA2A3N6 862 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 RNF225M0QZC1 329 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 POLR1CO15160 346 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 KRT86O43790 486 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CUTAO60888 179 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PPP6R2O75170 966 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 GRAP2O75791 330 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 RHOBTB3O94955 611 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 POP4O95707 220 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 GSRP00390 522 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 FGF1P05230 155 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 EPB41P11171 864 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CCNB1P14635 433 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 BMP6P22004 513 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CASP14P31944 242 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 GPD2P43304 727 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 GPLD1P80108 840 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 DNM1Q05193 864 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ILF3Q12906 894 aaKnown RBP eCLIP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CHAF1BQ13112 559 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 TMEM52BQ4KMG9 183 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ATXN7L2Q5T6C5 722 aaPredicted RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CPZQ66K79 652 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 DENND1BQ6P3S1 775 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ZNF783Q6ZMS7 281 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PLPP6Q8IY26 295 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 Q8NA96 180 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PLA2G15Q8NCC3 412 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 FUBP1Q96AE4 644 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ISG20Q96AZ6 181 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 STAMBPL1Q96FJ0 436 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 SLC2A13Q96QE2 648 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 GSDMCQ9BYG8 508 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 CARS2Q9HA77 564 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 FAM13BQ9NYF5 915 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 TAAR2Q9P1P5 351 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 MAPK8IP1Q9UQF2 711 aa10.28□□□□□ -0.76
HDAC3-203ENST00000467533 PCDHGA9Q9Y5G4 932 aaKnown RBP10.28□□□□□ -0.76
HDAC3-203ENST00000467533 ANKUB1A6NFN9 424 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 PRSS44E7EML9 344 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 TNFRSF10CO14798 259 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 PPM1DO15297 605 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 DPM1O60762 260 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 HSF2BPO75031 334 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 CREG1O75629 220 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 CBX6O95503 412 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 CD160O95971 181 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 STAT1P42224 750 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 PER3P56645 1201 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 GNA12Q03113 381 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 RAD51Q06609 339 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SQSTM1Q13501 440 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 RAPGEF1Q13905 1077 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 CHRNA6Q15825 494 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 MYLK3Q32MK0 819 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SLC6A19Q695T7 634 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SP5Q6BEB4 398 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SLC30A9Q6PML9 568 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 C6orf15Q6UXA7 325 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-203ENST00000467533 GDF7Q7Z4P5 450 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SLC47A2Q86VL8 602 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 ZNF761Q86XN6 746 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-203ENST00000467533 DRC7Q8IY82 874 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 ZNF683Q8IZ20 524 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 PPM1KQ8N3J5 372 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 GALNT6Q8NCL4 622 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 OR10G6Q8NH81 332 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 ARHGEF2Q92974 986 aaKnown RBP10.27□□□□□ -0.77
HDAC3-203ENST00000467533 C19orf60Q96EN9 201 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 LURAP1Q96LR2 239 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 SLC4A5Q9BY07 1137 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 TKTL2Q9H0I9 626 aa10.27□□□□□ -0.77
HDAC3-203ENST00000467533 ACSS2Q9NR19 701 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms