RNA–Protein interactions for RNA: ENST00000467371.1

SPTBN1-204, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 3,332 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-204ENST00000467371 CACNA2D1P54289 1103 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 RAD23BP54727 409 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 EEF1A1P68104 462 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 EEF1A2Q05639 463 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 FAAP100Q0VG06 881 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PTK6Q13882 451 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 NKAIN1Q4KMZ8 207 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 EEF1A1P5Q5VTE0 462 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ANKS1BQ7Z6G8 1248 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 SYCE1Q8N0S2 351 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 AKR7LQ8NHP1 331 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 WDR60Q8WVS4 1066 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 OR1E3Q8WZA6 343 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GCNAQ96QF7 691 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CACNG6Q9BXT2 260 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 RAB33BQ9H082 229 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PABPC3Q9H361 631 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 RIBC2Q9H4K1 309 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MAGEE1Q9HCI5 957 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TFCP2L1Q9NZI6 479 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ZNF148Q9UQR1 794 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 RGPD5Q99666 1765 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GOLGA8JA6NMD2 632 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GOLGA8TH3BQL2 631 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ECE2O60344 883 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 SNX3O60493 162 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CDC123O75794 336 aaPredicted RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 HEXIM1O94992 359 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 SPATA31D3P0C874 917 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GOLGA8HP0CJ92 632 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CLUP10909 449 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CPB1P15086 417 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TKTP29401 623 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CDC25AP30304 524 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CAPGP40121 348 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GABRB2P47870 512 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 CCINQ13939 588 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 GSTA3Q16772 222 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 THEM4Q5T1C6 240 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 SPATA31D4Q6ZUB0 917 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MIGA2Q7L4E1 593 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 LONP2Q86WA8 852 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PDCD6IPQ8WUM4 868 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PERPQ96FX8 193 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 RXFP1Q9HBX9 757 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MRPL15Q9P015 296 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ASIC3Q9UHC3 531 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TFR2Q9UP52 801 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MYH10P35580 1976 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 POLRMTO00411 1230 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TGFB1I1O43294 461 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MTX2O75431 263 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 HTR3BO95264 441 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 KCNK5O95279 499 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ITGB3P05106 788 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PTDSS1P48651 473 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 METAP2P50579 478 aaKnown RBP eCLIP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 HPCAP84074 193 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 PTPN11Q06124 597 aaPredicted RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 UGP2Q16851 508 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 FAM98BQ52LJ0 330 aaKnown RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 C9orf152Q5JTZ5 239 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 STYK1Q6J9G0 422 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 HEPHL1Q6MZM0 1159 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 INO80CQ6PI98 192 aaPredicted RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 FOXR2Q6PJQ5 311 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 MIER3Q7Z3K6 550 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 UBLCP1Q8WVY7 318 aaPredicted RBP7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ASZ1Q8WWH4 475 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TUBB6Q9BUF5 446 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 KCNH7Q9NS40 1196 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 TBC1D23Q9NUY8 699 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 ARHGEF38Q9NXL2 777 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 SLC22A14Q9Y267 594 aa7.73□□□□□ -1.17
SPTBN1-204ENST00000467371 A0A0U1RQV5 110 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 HTR3EA5X5Y0 456 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 SLC22A31A6NKX4 558 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 CRCPO75575 148 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 DDAH2O95865 285 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 TGFAP01135 160 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 CNPP09543 421 aaKnown RBP7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 ZCCHC18P0CG32 403 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 CD44P16070 742 aaKnown RBP7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 MMP13P45452 471 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 NAGLUP54802 743 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 MRPS25P82663 173 aaKnown RBP7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 CLN3Q13286 438 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 FAM98CQ17RN3 349 aaKnown RBP7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 LEXMQ3ZCV2 418 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 TMEM177Q53S58 311 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 TBC1D10CQ8IV04 446 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 CCNJLQ8IV13 435 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 BBS1Q8NFJ9 593 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 NCOA7Q8NI08 942 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 FBXO32Q969P5 355 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 SAMD8Q96LT4 415 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 ADAM7Q9H2U9 754 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 LRRC40Q9H9A6 602 aa7.72□□□□□ -1.17
SPTBN1-204ENST00000467371 LIN7BQ9HAP6 207 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms