RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 SNAP23O00161 211 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 PLGP00747 810 aaPredicted RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 AFPP02771 609 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 RPL36AP83881 106 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 SF3B4Q15427 424 aaKnown RBP eCLIP4.27□□□□□ -1.737e-8■■■■■ 35
SMC4-207ENST00000467263 EFNB3Q15768 340 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 MMEL1Q495T6 779 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 TXNDC8Q6A555 127 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 CPLX2Q6PUV4 134 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 B3GNT6Q6ZMB0 384 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 ZCCHC9Q8N567 271 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 FBXL8Q96CD0 374 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 KLHL29Q96CT2 875 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 SCMH1Q96GD3 660 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 ZNF570Q96NI8 536 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 CSF3RQ99062 836 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 PAIP1Q9H074 479 aaKnown RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 SLC25A18Q9H1K4 315 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 MAGEE1Q9HCI5 957 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 PPP1R14DQ9NXH3 145 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 C9orf78Q9NZ63 289 aaPredicted RBP4.27□□□□□ -1.73
SMC4-207ENST00000467263 PDP2Q9P2J9 529 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 SLC9A2Q9UBY0 812 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 MALT1Q9UDY8 824 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 SLC13A4Q9UKG4 626 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 GJD2Q9UKL4 321 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 CDC14AQ9UNH5 594 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 SNX9Q9Y5X1 595 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 CYP46A1Q9Y6A2 500 aa4.27□□□□□ -1.73
SMC4-207ENST00000467263 PLSCR5A0PG75 271 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 LDLRAD4O15165 306 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 CAMTA2O94983 1202 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 NDUFB4O95168 129 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 MT-CYBP00156 380 aaPredicted RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 F9P00740 461 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 TFP02787 698 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 COMPP49747 757 aaPredicted RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 EEF1A2Q05639 463 aaKnown RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 RNPS1Q15287 305 aaKnown RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 HIST2H2ACQ16777 129 aaPredicted RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 PRICKLE4Q2TBC4 344 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 SETMARQ53H47 684 aaPredicted RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 SGO1Q5FBB7 561 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 PAPPA-AS1Q5QFB9 102 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 FAM69BQ5VUD6 431 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 HIST2H2BCQ6DN03 193 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 HIST2H2BDQ6DRA6 164 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 LCTLQ6UWM7 567 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 NEK10Q6ZWH5 1172 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 SLC35F3Q8IY50 421 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 SCCPDHQ8NBX0 429 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 ZNF114Q8NC26 417 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 LILRB1Q8NHL6 650 aaPredicted RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 PABPC5Q96DU9 382 aaKnown RBP4.26□□□□□ -1.73
SMC4-207ENST00000467263 ADGRG7Q96K78 797 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 C1QTNF4Q9BXJ3 329 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 BPIFA1Q9NP55 256 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 NOX4Q9NPH5 578 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 KCND2Q9NZV8 630 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 RCOR1Q9UKL0 485 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 SARDHQ9UL12 918 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 A4GNTQ9UNA3 340 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 GTF2A1LQ9UNN4 478 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 CAMK2AQ9UQM7 478 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 NFS1Q9Y697 457 aa4.26□□□□□ -1.73
SMC4-207ENST00000467263 IGLV5-37A0A075B6J1 123 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 PLEKHD1A6NEE1 506 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 A6NLC8 198 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 IRF1P10914 325 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 G6PDP11413 515 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 AGAP20933 346 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 CHATP28329 748 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 HNRNPH1P31943 449 aaKnown RBP4.25□□□□□ -1.73
SMC4-207ENST00000467263 SHMT1P34896 483 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 EIF2S3P41091 472 aaKnown RBP4.25□□□□□ -1.73
SMC4-207ENST00000467263 GNAQP50148 359 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 PEX5P50542 639 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 COASYQ13057 564 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 NEDD9Q14511 834 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 TCTN1Q2MV58 587 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 ANKRD54Q6NXT1 300 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 GSG1LQ6UXU4 331 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 CREB3L4Q8TEY5 395 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 ZUFSPQ96AP4 578 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 MTBPQ96DY7 904 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 MMTAG2Q9BU76 263 aaKnown RBP4.25□□□□□ -1.73
SMC4-207ENST00000467263 AGXT2Q9BYV1 514 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 TKTL2Q9H0I9 626 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 PCDHB16Q9NRJ7 776 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 MPP6Q9NZW5 540 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 NAALADL1Q9UQQ1 740 aa4.25□□□□□ -1.73
SMC4-207ENST00000467263 CPED1A4D0V7 1026 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SMTNL1A8MU46 457 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 WNT9BO14905 357 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 SEC14L5O43304 696 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 TNFSF14O43557 240 aa4.24□□□□□ -1.73
SMC4-207ENST00000467263 NDUFS7O75251 213 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms