RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SLC12A3P55017 1021 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 DPYSL3Q14195 570 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SMCO1Q147U7 214 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ACAP2Q15057 778 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SMU1Q2TAY7 513 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 NEPROQ6NW34 567 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 PSRC1Q6PGN9 363 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 AADATQ8N5Z0 425 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 HEXDCQ8WVB3 486 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 KAT5Q92993 513 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 EHD3Q9NZN3 535 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 STX16-NPEPL1H3BU86 382 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 APOC4-APOC2K7ER74 178 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 STX16O14662 325 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 FFAR3O14843 346 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GPR42O15529 346 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SLC25A14O95258 325 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 TRUB2O95900 331 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 APOC2P02655 101 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ALADP13716 330 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ATP1A4Q13733 1029 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GALNT3Q14435 633 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 TXNDC11Q6PKC3 985 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 HPS6Q86YV9 775 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CD101Q93033 1021 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MTMR9Q96QG7 549 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MAF1Q9H063 256 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CHADO15335 359 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GMFGO60234 142 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 USP12O75317 370 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 DUSP11O75319 330 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 PCCBP05166 539 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CCNB1P14635 433 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GPD2P43304 727 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ARFIP1P53367 373 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 RAB2AP61019 212 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 KLHL12Q53G59 568 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MAP4K3Q8IVH8 894 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 PTGR2Q8N8N7 351 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 KIAA0895Q8NCT3 520 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 PJA1Q8NG27 643 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 OR52K1Q8NGK4 314 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 C5orf34Q96MH7 638 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SEMA6AQ9H2E6 1030 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 IMP3Q9NV31 184 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 LIN7AO14910 233 aaPredicted RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 CCL16O15467 120 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SERPINB7O75635 380 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CCDC166P0CW27 439 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CCL5P13501 91 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 CES1P23141 567 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GABRR2P28476 465 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MASP1P48740 699 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 RPL38P63173 70 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 FAAP100Q0VG06 881 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GPR158Q5T848 1215 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ZDHHC20Q5W0Z9 365 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 GALNT7Q86SF2 657 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ATCAYQ86WG3 371 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MYCBPAPQ8TBZ2 947 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 FBXO25Q8TCJ0 367 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 OMA1Q96E52 524 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 MAML3Q96JK9 1138 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 ZFRQ96KR1 1074 aaKnown RBP8.74□□□□□ -1.01
HPS4-209ENST00000466781 SEZ6LQ9BYH1 1024 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 NINJ2Q9NZG7 142 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SALL3Q9BXA9 1300 aa8.74□□□□□ -1.01
HPS4-209ENST00000466781 SMIM35A0A1B0GVV1 85 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 TNFAIP8O95379 198 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 PIGNO95427 931 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 DLK2Q6UY11 383 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 DEF8Q6ZN54 512 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 MAB21L3Q8N8X9 362 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 C12orf50Q8NA57 414 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 PHF10Q8WUB8 498 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 MYDGFQ969H8 173 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CD248Q9HCU0 757 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CRNNQ9UBG3 495 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 ADAM28Q9UKQ2 775 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 GIT1Q9Y2X7 761 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 A0A0A0MRY4 1105 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 KDELR1P24390 212 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CBX5P45973 191 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 IDH2P48735 452 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 STXBP1P61764 594 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 TARBP2Q15633 366 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 ZCCHC23Q6ZST2 131 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CHSY3Q70JA7 882 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 CDH24Q86UP0 819 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 IQCF2Q8IXL9 164 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 PEX5LQ8IYB4 626 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 BHLHE22Q8NFJ8 381 aaPredicted RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 SPATA13Q96N96 652 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 TRNT1Q96Q11 434 aaKnown RBP8.73□□□□□ -1.01
HPS4-209ENST00000466781 SPATA9Q9BWV2 254 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 C1QTNF1Q9BXJ1 281 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 SEMA3GQ9NS98 782 aa8.73□□□□□ -1.01
HPS4-209ENST00000466781 MFHAS1Q9Y4C4 1052 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms